1NQT | pdb_00001nqt

Crystal structure of bovine Glutamate dehydrogenase-ADP complex


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ld1nqtl1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ld1nqtl2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Kd1nqtk1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Kd1nqtk2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Jd1nqtj1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Jd1nqtj2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Id1nqti1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Id1nqti2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Hd1nqth1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Hd1nqth2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Gd1nqtg1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Gd1nqtg2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Fd1nqtf1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Fd1nqtf2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ed1nqte1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ed1nqte2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Dd1nqtd1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Dd1nqtd2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Cd1nqtc1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Cd1nqtc2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Bd1nqtb1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Bd1nqtb2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ad1nqta1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Aminoacid dehydrogenase-like, C-terminal domain Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)
Ad1nqta2 Alpha and beta proteins (a/b) Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenase-like, N-terminal domain Aminoacid dehydrogenases Glutamate dehydrogenase (Bos taurus ) [TaxId: 9913 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
LSCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMtdA-like 8054255 3000046 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
LFAD_binding_3e1nqtL1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
LEPSP_synthasee1nqtL2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
KFAD_binding_3e1nqtK1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
KEPSP_synthasee1nqtK2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
JFAD_binding_3e1nqtJ1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
JEPSP_synthasee1nqtJ2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
IFAD_binding_3e1nqtI1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
IEPSP_synthasee1nqtI2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
HFAD_binding_3e1nqtH1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
HEPSP_synthasee1nqtH2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
GFAD_binding_3e1nqtG1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
GEPSP_synthasee1nqtG2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
FFAD_binding_3e1nqtF1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
FEPSP_synthasee1nqtF2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
EFAD_binding_3e1nqtE1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
EEPSP_synthasee1nqtE2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
DFAD_binding_3e1nqtD1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
DEPSP_synthasee1nqtD2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
CFAD_binding_3e1nqtC1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
CEPSP_synthasee1nqtC2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
BFAD_binding_3e1nqtB1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
BEPSP_synthasee1nqtB2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)
AFAD_binding_3e1nqtA1 A: a/b three-layered sandwichesX: HTHH: HTHT: winged helix domainF: FAD_binding_3ECOD (v294.1)
AEPSP_synthasee1nqtA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: ARM repeatT: ARM repeatF: EPSP_synthaseECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
L3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
L3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
L1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
K3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
K3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
K1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
J3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
J3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
J1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
I3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
I3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
I1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
H3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
H3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
H1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
G3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
G3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
G1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
F3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
F3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
F1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
E3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
E3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
E1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
D3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
D3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
D1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
C3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
C3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
C1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
B3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
B3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
B1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
A3.40.50.10860 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Leucine Dehydrogenase, chain A, domain 1CATH (4.3.0)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
A1.10.287.140 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02812Glu/Leu/Phe/Val dehydrogenase, dimerisation domain (ELFV_dehydrog_N)Glu/Leu/Phe/Val dehydrogenase, dimerisation domainDomain
A, B, C, D, E
PF00208Glutamate/Leucine/Phenylalanine/Valine dehydrogenase (ELFV_dehydrog)Glutamate/Leucine/Phenylalanine/Valine dehydrogenaseDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Glutamate dehydrogenase 1