1O94
Ternary complex between trimethylamine dehydrogenase and electron transferring flavoprotein
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Thioredoxin reductase-like | 8017579 | 3000050 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | FMN-linked oxidoreductases | 8017577 | 3000014 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | FMN-linked oxidoreductases | 8017577 | 3000014 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Thioredoxin reductase-like | 8017579 | 3000050 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Adenine nucleotide alpha hydrolases-like | 8040143 | 3001593 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Adenine nucleotide alpha hydrolases-like | 8040143 | 3001593 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Adenine nucleotide alpha hydrolases-like | 8040144 | 3001593 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Adenine nucleotide alpha hydrolases-like | 8040144 | 3001593 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Oxidored_FMN | e1o94A1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Oxidored_FMN | ECOD (1.6) |
A | mycofact_OYE_2 | e1o94A2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: mycofact_OYE_2 | ECOD (1.6) |
A | FAD_binding_3_1st | e1o94A3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Nucleotide-binding domain | F: FAD_binding_3_1st | ECOD (1.6) |
B | Oxidored_FMN | e1o94B1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Oxidored_FMN | ECOD (1.6) |
B | mycofact_OYE_2 | e1o94B2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: mycofact_OYE_2 | ECOD (1.6) |
B | FAD_binding_3_1st | e1o94B3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Nucleotide-binding domain | F: FAD_binding_3_1st | ECOD (1.6) |
C | ETF | e1o94C1 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: ETF | ECOD (1.6) |
E | ETF | e1o94E1 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: ETF | ECOD (1.6) |
D | ETF | e1o94D1 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: ETF | ECOD (1.6) |
F | ETF | e1o94F1 | A: a/b three-layered sandwiches | X: HUP domain-like | H: HUP domains (From Topology) | T: HUP domains | F: ETF | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
A | 3.50.50.60 | Alpha Beta | 3-Layer(bba) Sandwich | FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain | CATH (4.3.0) |
B | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
B | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (4.3.0) |
B | 3.50.50.60 | Alpha Beta | 3-Layer(bba) Sandwich | FAD/NAD(P)-binding domain | FAD/NAD(P)-binding domain | CATH (4.3.0) |
C | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
E | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
D | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
F | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00724 | NADH:flavin oxidoreductase / NADH oxidase family (Oxidored_FMN) | NADH:flavin oxidoreductase / NADH oxidase family | - | Domain | |
PF22620 | OYE-like second alpha/beta domain (OYE-like_second_a-b) | OYE-like second alpha/beta domain | This domain is found in a group of diverse dehydrogenases from the old yellow enzyme (OYE)-like family, such as histamine dehydrogenase from Nocardioides simplex, trimethylamine dehydrogenase from Methylophilus methylotrophus (sp. W(3)A(1)) and 2-nap ... | Domain | |
PF13450 | NAD(P)-binding Rossmann-like domain (NAD_binding_8) | NAD(P)-binding Rossmann-like domain | - | Domain | |
PF01012 | Electron transfer flavoprotein domain (ETF) | Electron transfer flavoprotein domain | This family includes the homologous domain shared between the alpha and beta subunits of the electron transfer flavoprotein [1]. | Domain | |
PF01012 | Electron transfer flavoprotein domain (ETF) | Electron transfer flavoprotein domain | This family includes the homologous domain shared between the alpha and beta subunits of the electron transfer flavoprotein [1]. | Domain |