1R8G
Structure and function of YbdK
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1r8ga_ | Alpha and beta proteins (a+b) | Glutamine synthetase/guanido kinase | Glutamine synthetase/guanido kinase | Glutamate-cysteine ligase family 2 (GCS2) | Carboxylate-amine ligase YbdK | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d1r8gb_ | Alpha and beta proteins (a+b) | Glutamine synthetase/guanido kinase | Glutamine synthetase/guanido kinase | Glutamate-cysteine ligase family 2 (GCS2) | Carboxylate-amine ligase YbdK | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Glutamine synthetase/guanido kinase | 8038786 | 3000676 | SCOP2B (2022-06-29) |
B | SCOP2 Family | Glutamate-cysteine ligase family 2 (GCS2) | 8026407 | 4002776 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Glutamine synthetase/guanido kinase | 8038786 | 3000676 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | GCS2 | e1r8gA1 | A: a+b two layers | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase (From Topology) | T: Glutamine synthetase/guanido kinase | F: GCS2 | ECOD (1.6) |
B | GCS2 | e1r8gB1 | A: a+b two layers | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase (From Topology) | T: Glutamine synthetase/guanido kinase | F: GCS2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.590.20 | Alpha Beta | 2-Layer Sandwich | Creatine Kinase | Chain A, domain 2 | CATH (4.3.0) |
B | 3.30.590.20 | Alpha Beta | 2-Layer Sandwich | Creatine Kinase | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04107 | Glutamate-cysteine ligase family 2(GCS2) (GCS2) | Glutamate-cysteine ligase family 2(GCS2) | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Hypothetical protein ybdK |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011793 | Putative glutamate--cysteine ligase YbdK | Family | |
IPR050141 | Glutamate--cysteine ligase type 2, YbdK subfamily | Family | |
IPR006336 | Glutamate--cysteine ligase, GCS2 | Family | |
IPR014746 | Glutamine synthetase/guanido kinase, catalytic domain | Homologous Superfamily |