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 1RDU | pdb_00001rdu

NMR STRUCTURE OF A PUTATIVE NIFB PROTEIN FROM THERMOTOGA (TM1290), WHICH BELONGS TO THE DUF35 FAMILY

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1rdua_ Alpha and beta proteins (a/b) Ribonuclease H-like motif Nitrogenase accessory factor-like MTH1175-like Hypothetical protein TM1290 (Thermotoga maritima ) [TaxId: 2336 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyMTH1175-like 8026450 4000559 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNitrogenase accessory factor-like 8038829 3000583 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANitro_FeMo-Coe1rduA1 A: alpha arraysX: Ribonuclease H-likeH: Nitrogenase accessory factor-likeT: Nitrogenase accessory factor-likeF: Nitro_FeMo-CoECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.420.130 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02579Dinitrogenase iron-molybdenum cofactor (Nitro_FeMo-Co)Dinitrogenase iron-molybdenum cofactorThis family contains several NIF (B, Y and X) proteins which are iron-molybdenum cofactors (FeMo-co) in the dinitrogenase enzyme which catalyses the reduction of dinitrogen to ammonium. Dinitrogenase is a hetero-tetrameric (alpha(2)beta(2)) enzyme wh ...This family contains several NIF (B, Y and X) proteins which are iron-molybdenum cofactors (FeMo-co) in the dinitrogenase enzyme which catalyses the reduction of dinitrogen to ammonium. Dinitrogenase is a hetero-tetrameric (alpha(2)beta(2)) enzyme which contains the iron-molybdenum cofactor (FeMo-co) at its active site [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR033913MTH1175 domainDomain
IPR003731Dinitrogenase iron-molybdenum cofactor biosynthesisDomain
IPR036105Dinitrogenase iron-molybdenum cofactor biosynthesis superfamilyHomologous Superfamily