1RJV | pdb_00001rjv

Solution Structure of Human alpha-Parvalbumin refined with a paramagnetism-based strategy

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1rjva_	All alpha proteins	EF Hand-like	EF-hand	Parvalbumin	Parvalbumin	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Parvalbumin	8026524	4000925	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	EF-hand	8038903	3001983	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	EF-hand_1, EF-hand_7	e1rjvA1	A: a/b three-layered sandwiches	X: ETN0001 domain-like	H: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	T: alpha-2-Macroglobulin receptor associated protein (RAP) domain 1	F: EF-hand_1, EF-hand_7	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.238.10	Mainly Alpha	Orthogonal Bundle	Recoverin	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13499	EF-hand domain pair (EF-hand_7)	EF-hand domain pair		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Parvalbumin alpha	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding	trans-synaptic signaling regulation of biological process signaling biological regulation cell-cell signaling chemical synaptic transmission cell communication synaptic signaling anterograde trans-synaptic signaling cellular process inhibitory chemical synaptic transmission excitatory chemical synaptic transmission biosynthetic process metabolic process trans-synaptic signaling regulation of biological process signaling biological regulation cell-cell signaling chemical synaptic transmission cell communication synaptic signaling anterograde trans-synaptic signaling cellular process inhibitory chemical synaptic transmission excitatory chemical synaptic transmission biosynthetic process metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process multicellular organismal process system process muscle system process relaxation of muscle	axon cell projection cellular anatomical structure neuron projection plasma membrane bounded cell projection intracellular anatomical structure cytoplasm synapse cell junction

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR008080	Parvalbumin	Family
A	IPR018247	EF-Hand 1, calcium-binding site	Binding Site
A	IPR002048	EF-hand domain	Domain
A	IPR011992	EF-hand domain pair	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P20472	renal cell carcinoma schizophrenia schizoaffective disorder visual epilepsy bipolar disorder collecting duct carcinoma papillary renal cell carcinoma chromophobe renal cell carcinoma sarcomatoid renal cell carcinoma oncocytic adenoma exocrine pancreatic carcinoma Generalized Absence Seizures malignant glioma gastric cancer large cell medulloblastoma renal cell carcinoma schizophrenia schizoaffective disorder visual epilepsy bipolar disorder collecting duct carcinoma papillary renal cell carcinoma chromophobe renal cell carcinoma sarcomatoid renal cell carcinoma oncocytic adenoma exocrine pancreatic carcinoma Generalized Absence Seizures malignant glioma gastric cancer large cell medulloblastoma amyotrophic lateral sclerosis malignant mesothelioma atypical teratoid rhabdoid tumor neurodegenerative disease pilocytic astrocytoma Down syndrome gastric carcinoma schizophreniform disorder glioblastoma interstitial cystitis subependymal giant cell astrocytoma malignant ependymoma astrocytic tumor malignant pancreatic neoplasm autism medulloblastoma clear cell renal carcinoma Crohn disease primitive neuroectodermal tumor epilepsy renal carcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.