Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyMMP N-terminal domain8020040 4002891 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPGBD-like8032420 3001357 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyMetalloproteases (zincins) catalytic domain8035528 3001975 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APG_binding_1e1slmA1 A: alpha arraysX: PGBD-like (From Topology)H: PGBD-like (From Topology)T: PGBD-likeF: PG_binding_1ECOD (1.6)
APeptidase_M10e1slmA2 A: mixed a+b and a/bX: Zincin-likeH: Metalloproteases (zincins) catalytic domain (From Topology)T: Metalloproteases (zincins) catalytic domainF: Peptidase_M10ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.390.10 Alpha Beta 3-Layer(aba) Sandwich Collagenase (Catalytic Domain) Collagenase (Catalytic Domain)CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00413Matrixin (Peptidase_M10)MatrixinThe members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis.Domain
PF01471Putative peptidoglycan binding domain (PG_binding_1)Putative peptidoglycan binding domainThis domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is ...This domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins [3]. The domain is found to bind peptidoglycan experimentally [4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
STROMELYSIN-1