1T5C | pdb_00001t5c

Crystal structure of the motor domain of human kinetochore protein CENP-E

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1t5cb_	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	automated matches	automated matches	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d1t5ca_	Alpha and beta proteins (a/b)	P-loop containing nucleoside triphosphate hydrolases	P-loop containing nucleoside triphosphate hydrolases	automated matches	automated matches	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2 Family	Kinesin motor domain	8078406	4004055	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	P-loop motor domain	8078407	3002036	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	P-loop motor domain	8078407	3002036	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e1t5cB1	A: HTH	X: HTH	H: winged helix domain	T: MATH_2	F:	ECOD (20:10:01)
A		e1t5cA1	A: Globin-like	X: Globin-like	H: Globin-like	T: RGS	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.850.10	Alpha Beta	3-Layer(aba) Sandwich	Kinesin	Kinesin motor domain	CATH (4.3.0)
A	3.40.850.10	Alpha Beta	3-Layer(aba) Sandwich	Kinesin	Kinesin motor domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00225	Kinesin motor domain (Kinesin)	Kinesin motor domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Centromeric protein E	microtubule motor activity polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity binding kinetochore binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding microtubule motor activity polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity binding kinetochore binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cytoskeletal protein binding microtubule binding protein binding tubulin binding	cellular process cell cycle mitotic cell cycle regulation of chromosome segregation regulation of cell cycle phase transition regulation of cellular process regulation of metaphase/anaphase transition of cell cycle regulation of cellular component organization cell cycle phase transition regulation of mitotic metaphase/anaphase transition cellular component organization regulation of mitotic cell cycle cellular component organization or biogenesis regulation of cell cycle cellular process cell cycle mitotic cell cycle regulation of chromosome segregation regulation of cell cycle phase transition regulation of cellular process regulation of metaphase/anaphase transition of cell cycle regulation of cellular component organization cell cycle phase transition regulation of mitotic metaphase/anaphase transition cellular component organization regulation of mitotic cell cycle cellular component organization or biogenesis regulation of cell cycle chromosome segregation cell cycle process regulation of biological process regulation of cell cycle process biological regulation chromosome organization sister chromatid segregation regulation of chromosome organization regulation of organelle organization regulation of mitotic cell cycle phase transition organelle organization mitotic cell cycle process regulation of sister chromatid segregation nuclear chromosome segregation metaphase/anaphase transition of mitotic cell cycle metaphase/anaphase transition of cell cycle mitotic cell cycle phase transition organelle assembly protein-containing complex organization membraneless organelle assembly cellular component biogenesis cellular component assembly kinetochore assembly protein-containing complex assembly kinetochore organization localization mitotic chromosome movement towards spindle pole chromosome localization organelle localization mitotic sister chromatid segregation chromosome movement towards spindle pole mitotic nuclear division organelle fission nuclear division microtubule-based movement microtubule-based process mitotic metaphase chromosome alignment metaphase chromosome alignment attachment of spindle microtubules to kinetochore attachment of mitotic spindle microtubules to kinetochore cell division lateral attachment of mitotic spindle microtubules to kinetochore establishment of organelle localization cellular localization establishment of localization in cell establishment of localization microtubule plus-end directed mitotic chromosome migration microtubule cytoskeleton organization mitotic spindle organization cytoskeleton organization microtubule cytoskeleton organization involved in mitosis spindle organization regulation of protein modification process positive regulation of phosphorylation regulation of catalytic activity regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of biological process regulation of transferase activity positive regulation of phosphate metabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of molecular function positive regulation of protein modification process phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of protein kinase activity phosphorus metabolic process protein modification process positive regulation of protein phosphorylation positive regulation of cellular process protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation regulation of protein metabolic process positive regulation of catalytic activity primary metabolic process regulation of protein kinase activity regulation of macromolecule metabolic process regulation of molecular function positive regulation of kinase activity regulation of kinase activity macromolecule modification regulation of phosphorylation regulation of phosphorus metabolic process metabolic process macromolecule metabolic process regulation of metabolic process	midbody cellular anatomical structure membrane intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle midzone microtubule cytoskeleton cytoplasm cytosol midbody cellular anatomical structure membrane intracellular organelle intracellular anatomical structure cytoskeleton spindle organelle membraneless organelle intracellular membraneless organelle spindle midzone microtubule cytoskeleton cytoplasm cytosol chromosome, centromeric region chromosome chromosomal region mitotic spindle intercellular bridge polymeric cytoskeletal fiber spindle microtubule kinetochore microtubule supramolecular fiber microtubule supramolecular polymer supramolecular complex kinetochore condensed chromosome, centromeric region condensed chromosome mitotic spindle midzone membrane-bounded organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036961	Kinesin motor domain superfamily	Homologous Superfamily
A, B	IPR001752	Kinesin motor domain	Domain
A, B	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B	IPR027640	Kinesin-like protein	Family
A, B	IPR019821	Kinesin motor domain, conserved site	Conserved Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q02224	microcephaly 13, primary, autosomal recessive microcephaly Seckel syndrome testicular germ cell tumor pancreatic intraductal papillary-mucinous carcinoma primitive neuroectodermal tumor Sjogren syndrome adrenal cortex carcinoma breast cancer glioblastoma large cell medulloblastoma malignant colon neoplasm non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm psoriasis microcephaly 13, primary, autosomal recessive microcephaly Seckel syndrome testicular germ cell tumor pancreatic intraductal papillary-mucinous carcinoma primitive neuroectodermal tumor Sjogren syndrome adrenal cortex carcinoma breast cancer glioblastoma large cell medulloblastoma malignant colon neoplasm non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm psoriasis testicular cancer atopic eczema ductal breast carcinoma in situ hepatocellular carcinoma lung adenocarcinoma malignant glioma ovarian cancer Primary microcephaly atypical teratoid rhabdoid tumor endometriosis invasive ductal breast carcinoma lung cancer medulloblastoma nasopharyngeal carcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.