1TPH
1.8 ANGSTROMS CRYSTAL STRUCTURE OF WILD TYPE CHICKEN TRIOSEPHOSPHATE ISOMERASE-PHOSPHOGLYCOLOHYDROXAMATE COMPLEX
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth 1] | d1tph1_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Triosephosphate isomerase (TIM) | Triosephosphate isomerase (TIM) | Triosephosphate isomerase | chicken (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
B [auth 2] | d1tph2_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Triosephosphate isomerase (TIM) | Triosephosphate isomerase (TIM) | Triosephosphate isomerase | chicken (Gallus gallus ) [TaxId: 9031 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth 1] | SCOP2B Superfamily | Triosephosphate isomerase (TIM) | 8039744 | 3000190 | SCOP2B (2022-06-29) |
B [auth 2] | SCOP2B Superfamily | Triosephosphate isomerase (TIM) | 8039744 | 3000190 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth 1] | TIM | e1tph11 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: TIM | ECOD (1.6) |
B [auth 2] | TIM | e1tph21 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: TIM | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth 1] | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
B [auth 2] | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth 1], B [auth 2] | PF00121 | Triosephosphate isomerase (TIM) | Triosephosphate isomerase | Triosephosphate isomerase (EC:5.3.1.1) (TIM) [1] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is ess ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth 1], B [auth 2] | IPR035990 | Triosephosphate isomerase superfamily | Homologous Superfamily |
A [auth 1], B [auth 2] | IPR000652 | Triosephosphate isomerase | Family |
A [auth 1], B [auth 2] | IPR020861 | Triosephosphate isomerase, active site | Active Site |
A [auth 1], B [auth 2] | IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily |
A [auth 1], B [auth 2] | IPR022896 | Triosephosphate isomerase, bacterial/eukaryotic | Family |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
triosephosphate isomerase M-CSA #324 | Triosephosphate isomerase (TIM) is one of the most extensively characterised enzymes in the chemical literature. TIM is a glycolytic enzyme that catalyses the central reaction in the glycolytic pathway, the interconversion of D-glyceraldehyde 3-phosphate (GAP) and dihydroxyacetone phosphate (DHAP) with exceptionally high efficiency, while suppressing elimination of orthophosphate. It contains a large-scale catalytic loop motion, which alternates in open and closed positions. It is a homodimer and only the homodimer is fully active. TIM is known to exist in an unliganded and liganded conformation and the loop-6, in particular, would undergo the major conformational changes when there is a substrate or inhibitor bound at the active site. In addition, the shift of loop-6 preferentially stabilises the enediole phosphate intermediate. | Defined by 7 residues: ASN:A-10 [auth 1-11]LYS:A-12 [auth 1-13]HIS:A-94 [auth 1-95]GLU:A-96 [auth 1-97]GLU:A-164 [auth 1-165]GLY:A-170 [auth 1-171]SER:A-210 [auth 1-211] | EC: 5.3.1.1 (PDB Primary Data) EC: 4.2.3.3 (UniProt) |