Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth 1]SCOP2B SuperfamilyTriosephosphate isomerase (TIM) 8039744 3000190 SCOP2B (2022-06-29)
B [auth 2]SCOP2B SuperfamilyTriosephosphate isomerase (TIM) 8039744 3000190 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth 1]TIMe1tph11 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: TIMECOD (1.6)
B [auth 2]TIMe1tph21 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: TIMECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth 1]3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
B [auth 2]3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 1],
B [auth 2]
PF00121Triosephosphate isomerase (TIM)Triosephosphate isomeraseTriosephosphate isomerase (EC:5.3.1.1) (TIM) [1] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is ess ...Triosephosphate isomerase (EC:5.3.1.1) (TIM) [1] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production, present in eukaryotes and prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [2,3]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure [4]. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [5].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1],
B [auth 2]
TRIOSEPHOSPHATE ISOMERASE

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
triosephosphate isomerase  M-CSA #324

Triosephosphate isomerase (TIM) is one of the most extensively characterised enzymes in the chemical literature. TIM is a glycolytic enzyme that catalyses the central reaction in the glycolytic pathway, the interconversion of D-glyceraldehyde 3-phosphate (GAP) and dihydroxyacetone phosphate (DHAP) with exceptionally high efficiency, while suppressing elimination of orthophosphate. It contains a large-scale catalytic loop motion, which alternates in open and closed positions. It is a homodimer and only the homodimer is fully active. TIM is known to exist in an unliganded and liganded conformation and the loop-6, in particular, would undergo the major conformational changes when there is a substrate or inhibitor bound at the active site. In addition, the shift of loop-6 preferentially stabilises the enediole phosphate intermediate.

Its deficiency has been shown to enhance levels of dihydroxyacetone phosphate in humans and cause chronic anaemia and neuromuscular impairment. Due to its important place in glycolysis, TIM also forms an attractive target for drug design against parasites that have the ability to survive in the mammalian bloodstream. Among the various diseases currently ravaging the tropical world, those due to such parasites are some of the most serious ones (e.g., malaria and sleeping sickness). Control of these diseases is presently a major problem and has been a focus of attention of various agencies.

Defined by 7 residues: ASN:A-10 [auth 1-11]LYS:A-12 [auth 1-13]HIS:A-94 [auth 1-95]GLU:A-96 [auth 1-97]GLU:A-164 [auth 1-165]GLY:A-170 [auth 1-171]SER:A-210 [auth 1-211]
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