Structural basis for allostery in integrins and binding of ligand-mimetic therapeutics to the platelet receptor for fibrinogen
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2 Family | Plexin repeat-like | 8030353 | 4001807 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Plexin repeat-like | 8042732 | 3000415 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | Integrin domains | 8055552 | 3002062 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Integrin domains | 8055552 | 3002062 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | vWA-like | 8055554 | 3000832 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Plexin repeat-like | 8042732 | 3000415 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Integrin domains | 8055552 | 3002062 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | vWA-like | 8055554 | 3000832 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Integrin domains | 8055552 | 3002062 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Integrin domains | 8055552 | 3002062 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | vWA-like | 8055554 | 3000832 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Integrin domains | 8055552 | 3002062 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Plexin repeat-like | 8042732 | 3000415 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Integrin alpha N-terminal domain | 8030349 | 4003137 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Integrin alpha N-terminal domain | 8042728 | 3000314 | SCOP2 (2022-06-29) |
| C | SCOP2B Superfamily | Integrin alpha N-terminal domain | 8042728 | 3000314 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Integrin alpha N-terminal domain | 8042728 | 3000314 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e1tyeB1 | A: Immunoglobulin-like beta-sandwich | X: Immunoglobulin-related | H: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | T: | F: | ECOD (20:10:01) | |
| B | e1tyeB2 | A: Trefoil/Plexin domain-like | X: Trefoil/Plexin domain-like | H: Trefoil/Plexin domain-like | T: PSI_integrin | F: | ECOD (20:10:01) | |
| B | e1tyeB3 | A: Flavodoxin-like | X: HAD domain-related | H: vWA-like | T: VWA | F: | ECOD (20:10:01) | |
| F | e1tyeF1 | A: Thioredoxin-like | X: Thioredoxin-like | H: Thioredoxin-like | T: | F: | ECOD (20:10:01) | |
| D | e1tyeD1 | A: Thioredoxin-like | X: Thioredoxin-like | H: Thioredoxin-like | T: | F: | ECOD (20:10:01) | |
| A | e1tyeA1 | A: beta-propeller-like | X: beta-propeller | H: 7-bladed | T: FG-GAP, FG-GAP_3 | F: | ECOD (20:10:01) | |
| C | e1tyeC1 | A: Cloacin translocation domain | X: Cloacin translocation domain | H: Cloacin translocation domain | T: FG-GAP, FG-GAP_3 | F: | ECOD (20:10:01) | |
| E | e1tyeE1 | A: Cloacin translocation domain | X: Cloacin translocation domain | H: Cloacin translocation domain | T: DPPIV_N | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| INTEGRIN-ALPHA-IIB_BETA-3 | INTEGRIN-BETA-3 | Homo sapiens (human) | BETA-3 | P-LIKE-DOMAIN PSI, Y-LIKE-DOMAIN Hybrid-1, B-LIKE-DOMAIN BETA-1, Y-LIKE-DOMAIN Hybrid-2 | RPI | INTEGRIN-ALPHA-IIB_BETA-3 | IMGT (202609-0) | |
| INTEGRIN-ALPHA-IIB_BETA-3 | INTEGRIN-ALPHA-IIB | Homo sapiens (human) | ALPHA-IIB | BP-LIKE-DOMAIN B-Propeller | RPI | INTEGRIN-ALPHA-IIB_BETA-3 | IMGT (202609-0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF17205 | Integrin plexin domain (PSI_integrin) | Integrin plexin domain | This short disulphide rich domain is found at the N-terminus of integrin beta chains. | Domain | |
| PF00362 | Integrin beta chain VWA domain (Integrin_beta) | Integrin beta chain VWA domain | Integrins have been found in animals and their homologues have also been found in cyanobacteria, probably due to horizontal gene transfer [1]. This domain corresponds to the integrin beta VWA domain. | Domain | |
| PF01839 | FG-GAP repeat (FG-GAP) | FG-GAP repeat | - | Repeat |














