Annotations: 1U05

Crystal structure of protein yfiH from Shigella flexneri, Pfam DUF152

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1u05b_	Alpha and beta proteins (a+b)	CNF1/YfiH-like putative cysteine hydrolases	CNF1/YfiH-like putative cysteine hydrolases	YfiH-like	Hypothetical protein yfiH	(Shigella flexneri ) [TaxId: 623 ],	SCOPe (2.08)
A	d1u05a_	Alpha and beta proteins (a+b)	CNF1/YfiH-like putative cysteine hydrolases	CNF1/YfiH-like putative cysteine hydrolases	YfiH-like	Hypothetical protein yfiH	(Shigella flexneri ) [TaxId: 623 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	CNF1/YfiH-like putative cysteine hydrolases	8041825	3001230	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	CNF1/YfiH-like putative cysteine hydrolases	8041825	3001230	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	IGFBP	e1u05B1	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: IGFBP	ECOD (v295.2)
A	IGFBP	e1u05A1	A: alpha arrays	X: ETN0001 domain-like	H: ETN0001 domain-like	T: Mss4-like	F: IGFBP	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.60.140.10	Alpha Beta	4-Layer Sandwich	CNF1/YfiH-like putative cysteine hydrolases	CNF1/YfiH-like putative cysteine hydrolases	CATH (4.3.0)
A	3.60.140.10	Alpha Beta	4-Layer Sandwich	CNF1/YfiH-like putative cysteine hydrolases	CNF1/YfiH-like putative cysteine hydrolases	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF02578	Multi-copper polyphenol oxidoreductase laccase (Cu-oxidase_4)	Multi-copper polyphenol oxidoreductase laccase	Laccases are multi-copper oxidoreductases able to oxidise a wide variety of phenolic and non-phenolic compounds and are widely distributed among both prokaryotes and eukaryotes. There are two main active catalytic sites with conserved histidines that ...	Laccases are multi-copper oxidoreductases able to oxidise a wide variety of phenolic and non-phenolic compounds and are widely distributed among both prokaryotes and eukaryotes. There are two main active catalytic sites with conserved histidines that are capable of binding four copper atoms [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	orf, conserved hypothetical protein	cation binding transition metal ion binding copper ion binding ion binding binding metal ion binding small molecule binding hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines adenosine deaminase activity hydrolase activity catalytic activity deaminase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds pentosyltransferase activity cation binding transition metal ion binding copper ion binding ion binding binding metal ion binding small molecule binding hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines adenosine deaminase activity hydrolase activity catalytic activity deaminase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds pentosyltransferase activity glycosyltransferase activity S-methyl-5-thioadenosine phosphorylase activity purine-nucleoside phosphorylase activity transferase activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR011324	Cytotoxic necrotizing factor-like, catalytic	Homologous Superfamily
A, B	IPR003730	Multi-copper polyphenol oxidoreductase	Family
A, B	IPR038371	Multi-copper polyphenol oxidoreductase superfamily	Homologous Superfamily