1UN1
Xyloglucan endotransglycosylase native structure.
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d1un1b_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | Glycosyl hydrolases family 16 | Xyloglucan endotransglycosylase | EUROPEAN ASPEN (Populus tremula ) [TaxId: 113636 ], | SCOPe (2.08) |
A | d1un1a_ | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | Glycosyl hydrolases family 16 | Xyloglucan endotransglycosylase | EUROPEAN ASPEN (Populus tremula ) [TaxId: 113636 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Glyco_hydro_16 | e1un1B1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: Glyco_hydro_16 | ECOD (1.6) |
A | Glyco_hydro_16 | e1un1A1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: Glyco_hydro_16 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
A | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00722 | Glycosyl hydrolases family 16 (Glyco_hydro_16) | Glycosyl hydrolases family 16 | Domain | ||
PF06955 | Xyloglucan endo-transglycosylase (XET) C-terminus (XET_C) | Xyloglucan endo-transglycosylase (XET) C-terminus | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010713 | Xyloglucan endo-transglycosylase, C-terminal | Domain | |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR008263 | Glycoside hydrolase, family 16, active site | Active Site | |
IPR016455 | Xyloglucan endotransglucosylase/hydrolase | Family | |
IPR044791 | Beta-glucanase/XTH | Family | |
IPR000757 | Glycoside hydrolase family 16 | Domain |
Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage
Chains | Enzyme Name | Description | Catalytic Residues |
---|---|---|---|
xyloglucan:xyloglucosyl transferase M-CSA #826 | Xyloglucan Endotransglycosylase (XET) is sourced from Populus tremula. It cleaves and religates xyloglucan (a soluble hemicellulose with a backbone composed of beta(1->4)-linked glucose residues similar to cellulose) in plant cell walls via a transglycosylation mechanism. XET is therefore a key enzyme in plant cell processes requiring cell wall remodelling, such as germination, growth, fruit ripening, organ abscission and vascular differentiation. Specifically, XET breaks a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment onto the O-4 of the non-reducing terminal glucose residue of an acceptor. This acceptor can be a xyloglucan or an oligosaccharide of xyloglucan. During processes such as fruit ripening, hydrolytic enzymes can be produced to degrade the cell wall. After cell wall expansion and elongation, cell wall loosening is a temporary requirement that must be followed by reinforcement of the cell wall. In the first step XET catalyses endolytic cleavage of a cross-linking xyloglucan polymer, which permits cellulose microfibres to separate allowing cell expansion. In the second step XET transfers the newly generated end to another sugar polymer, restoring stable cell wall structure. XET requires sugar residues in both the donor and acceptor sites before it is able to catalyse the reaction. | Defined by 3 residues: GLU:B-91 [auth B-85]ASP:B-93 [auth B-87]GLU:B-95 [auth B-89] | EC: 2.4.1.207 (PDB Primary Data) |