1W9T | pdb_00001w9t

Structure of a beta-1,3-glucan binding CBM6 from Bacillus halodurans in complex with xylobiose

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1w9ta_	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	Family 6 carbohydrate binding module, CBM6	Hypothetical protein BH0236	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)
B	d1w9tb_	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	Family 6 carbohydrate binding module, CBM6	Hypothetical protein BH0236	(Halalkalibacterium halodurans ) [TaxId: 86665 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	galactose-binding domain-like	8043368	3000087	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	galactose-binding domain-like	8043368	3000087	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	CBM27	e1w9tA1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: CBM27	ECOD (develop294)
B	CBM27	e1w9tB1	A: alpha bundles	X: Cloacin translocation domain	H: beta-Prism I	T: beta-Prism I	F: CBM27	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)
B	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03422	Carbohydrate binding module (family 6) (CBM_6)	Carbohydrate binding module (family 6)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	BH0236 PROTEIN	binding carbohydrate binding hydrolase activity, acting on glycosyl bonds endo-1,3(4)-beta-glucanase activity beta-glucanase activity hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity glucosidase activity beta-glucosidase activity glucan endo-1,3-beta-D-glucosidase activity	cellular component organization cell wall organization or biogenesis cell wall organization cellular process cellular component organization or biogenesis external encapsulating structure organization carbohydrate metabolic process polysaccharide metabolic process catabolic process polysaccharide catabolic process carbohydrate catabolic process metabolic process primary metabolic process macromolecule metabolic process cellular component organization cell wall organization or biogenesis cell wall organization cellular process cellular component organization or biogenesis external encapsulating structure organization carbohydrate metabolic process polysaccharide metabolic process catabolic process polysaccharide catabolic process carbohydrate catabolic process metabolic process primary metabolic process macromolecule metabolic process macromolecule catabolic process	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR006584	Cellulose binding, type IV	Domain
A, B	IPR008979	Galactose-binding-like domain superfamily	Homologous Superfamily
A, B	IPR040720	Glycosyl hydrolase family 81, C-terminal domain	Domain
A, B	IPR005200	Endo-1,3(4)-beta-glucanase	Family
A, B	IPR005084	Carbohydrate binding module family 6	Domain
A, B	IPR047569	Carbohydrate binding module family 56	Domain
A, B	IPR040451	Glycosyl hydrolase family 81, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.