1XDN
High resolution crystal structure of an editosome enzyme from trypanosoma brucei: RNA editing ligase 1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1xdna_ | Alpha and beta proteins (a+b) | ATP-grasp | DNA ligase/mRNA capping enzyme, catalytic domain | RNA ligase | RNA editing ligase MP52 | (Trypanosoma brucei ) [TaxId: 5691 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.1490.70 | Alpha Beta | 2-Layer Sandwich | Dna Ligase | domain 1 | CATH (4.3.0) |
A | 3.30.470.30 | Alpha Beta | 2-Layer Sandwich | D-amino Acid Aminotransferase | Chain A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09414 | RNA ligase (RNA_ligase) | RNA ligase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041948 | RNA ligase 1/2, C-terminal domain superfamily | Homologous Superfamily | |
IPR012647 | RNA ligase, Rnl2 | Family | |
IPR021122 | RNA ligase domain, REL/Rln2 | Domain |