1Y82

Conserved hypothetical protein Pfu-367848-001 from Pyrococcus furiosus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1y82a1	Alpha and beta proteins (a/b)	PIN domain-like	PIN domain-like	PIN domain	Hypothetical protein PF0355	(Pyrococcus furiosus ) [TaxId: 2261 ],	SCOPe (2.08)
B	d1y82b_	Alpha and beta proteins (a/b)	PIN domain-like	PIN domain-like	PIN domain	Hypothetical protein PF0355	(Pyrococcus furiosus ) [TaxId: 2261 ],	SCOPe (2.08)
C	d1y82c_	Alpha and beta proteins (a/b)	PIN domain-like	PIN domain-like	PIN domain	Hypothetical protein PF0355	(Pyrococcus furiosus ) [TaxId: 2261 ],	SCOPe (2.08)
D	d1y82d_	Alpha and beta proteins (a/b)	PIN domain-like	PIN domain-like	PIN domain	Hypothetical protein PF0355	(Pyrococcus furiosus ) [TaxId: 2261 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	PIN domain	8021812	4000475	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PIN domain-like	8034192	3001041	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	PIN domain-like	8034192	3001041	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	PIN domain-like	8034192	3001041	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	PIN domain-like	8034192	3001041	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PIN	e1y82A1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: PIN	ECOD (1.6)
B	PIN	e1y82B1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: PIN	ECOD (1.6)
C	PIN	e1y82C1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: PIN	ECOD (1.6)
D	PIN	e1y82D1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: PIN	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.1010	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	5'-nuclease	CATH (4.3.0)
B	3.40.50.1010	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	5'-nuclease	CATH (4.3.0)
C	3.40.50.1010	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	5'-nuclease	CATH (4.3.0)
D	3.40.50.1010	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	5'-nuclease	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01850	PIN domain (PIN)	PIN domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	hypothetical protein	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding nuclease activity hydrolase activity, acting on ester bonds catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity hydrolase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR002716	PIN domain	Domain
A, B, C, D	IPR016647	Probable ribonuclease VapC, Thermococci	Family
A, B, C, D	IPR029060	PIN-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR051749	PINc/VapC Toxin-Antitoxin RNase	Family
A, B, C, D	IPR022907	VapC family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.