1YEX
Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Thioredoxin-like | 8057925 | 3000031 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Thioredoxin-like | 8057925 | 3000031 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Thioredoxin-like | 8057925 | 3000031 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Thioredoxin-like | 8057925 | 3000031 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Thioredoxin-like | 8057925 | 3000031 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | AhpC-TSA_1 | e1yexB1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: AhpC-TSA_1 | ECOD (1.6) |
C | AhpC-TSA_1 | e1yexC1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: AhpC-TSA_1 | ECOD (1.6) |
D | AhpC-TSA_1 | e1yexD1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: AhpC-TSA_1 | ECOD (1.6) |
A | AhpC-TSA_1 | e1yexA1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: AhpC-TSA_1 | ECOD (1.6) |
E | AhpC-TSA_1 | e1yexE1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: AhpC-TSA_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
C | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
D | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
A | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
E | 3.40.30.10 | Alpha Beta | 3-Layer(aba) Sandwich | Glutaredoxin | Glutaredoxin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00578 | AhpC/TSA family (AhpC-TSA) | AhpC/TSA family | This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA). | Domain | |
PF10417 | C-terminal domain of 1-Cys peroxiredoxin (1-cysPrx_C) | C-terminal domain of 1-Cys peroxiredoxin | This is the C-terminal domain of 1-Cys peroxiredoxin (1-cysPrx), a member of the peroxiredoxin superfamily which protect cells against membrane oxidation through glutathione (GSH)-dependent reduction of phospholipid hydroperoxides to corresponding al ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Alkyl hydroperoxide reductase subunit C |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019479 | Peroxiredoxin, C-terminal | Domain | |
IPR024706 | Peroxiredoxin, AhpC-type | Family | |
IPR050217 | Thiol-specific antioxidant peroxiredoxin | Family | |
IPR013766 | Thioredoxin domain | Domain | |
IPR017559 | Alkyl hydroperoxide reductase subunit C | Family | |
IPR036249 | Thioredoxin-like superfamily | Homologous Superfamily | |
IPR000866 | Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant | Domain |