1YK0

structure of natriuretic peptide receptor-C complexed with atrial natriuretic peptide

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Type 1 solute binding protein-like	8034348	3000125	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Type 1 solute binding protein-like	8034348	3000125	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	ANF_receptor_2nd	e1yk0B3	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Periplasmic binding protein-like I	F: ANF_receptor_2nd	ECOD (1.6)
B	ANF_receptor_2nd_1	e1yk0B2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Periplasmic binding protein-like I	F: ANF_receptor_2nd_1	ECOD (1.6)
A	ANF_receptor_2nd	e1yk0A3	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Periplasmic binding protein-like I	F: ANF_receptor_2nd	ECOD (1.6)
A	ANF_receptor_2nd_1	e1yk0A2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Periplasmic binding protein-like I	F: ANF_receptor_2nd_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (4.3.0)
A	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01094	Receptor family ligand binding region (ANF_receptor)	Receptor family ligand binding region	-	Family
C [auth E]	PF00212	Atrial natriuretic peptide (ANP)	Atrial natriuretic peptide	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Atrial natriuretic peptide clearance receptor	peptide receptor activity molecular transducer activity signaling receptor activity natriuretic peptide receptor activity ion binding binding anion binding chloride ion binding small molecule binding identical protein binding protein binding protein homodimerization activity protein dimerization activity amide binding peptide receptor activity molecular transducer activity signaling receptor activity natriuretic peptide receptor activity ion binding binding anion binding chloride ion binding small molecule binding identical protein binding protein binding protein homodimerization activity protein dimerization activity amide binding peptide hormone binding hormone binding G protein-coupled receptor activity G protein-coupled peptide receptor activity transmembrane signaling receptor activity peptide binding	multicellular organismal process system process circulatory system process regulation of blood pressure biological regulation regulation of biological quality blood circulation regulation of biological process cell population proliferation regulation of cellular process regulation of cell population proliferation cellular process regulation of osteoblast proliferation osteoblast proliferation multicellular organismal process system process circulatory system process regulation of blood pressure biological regulation regulation of biological quality blood circulation regulation of biological process cell population proliferation regulation of cellular process regulation of cell population proliferation cellular process regulation of osteoblast proliferation osteoblast proliferation regulation of catalytic activity positive regulation of catalytic activity regulation of oxidoreductase activity positive regulation of oxidoreductase activity positive regulation of nitric-oxide synthase activity regulation of molecular function positive regulation of molecular function regulation of monooxygenase activity positive regulation of monooxygenase activity regulation of nitric-oxide synthase activity developmental process blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development multicellular organism development anatomical structure morphogenesis tube morphogenesis anatomical structure development anatomical structure formation involved in morphogenesis blood vessel development system development skeletal system development response to stimulus response to stress response to ischemia regulation of body fluid levels renal system process positive regulation of urine volume regulation of urine volume cellular response to stimulus signaling signal transduction cell communication blood vessel remodeling tissue remodeling osteoclast proliferation leukocyte proliferation negative regulation of cold-induced thermogenesis homeostatic process negative regulation of metabolic process negative regulation of biological process adaptive thermogenesis multicellular organismal-level homeostasis regulation of cold-induced thermogenesis cold-induced thermogenesis temperature homeostasis metabolic process regulation of multicellular organismal process negative regulation of multicellular organismal process regulation of metabolic process	extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space cellular anatomical entity vesicle extracellular membrane-bounded organelle cell periphery plasma membrane membrane protein-containing complex
C [auth E]	Atrial natriuretic factor	protein binding binding signaling receptor binding hormone receptor binding molecular function activator activity neuropeptide activity signaling receptor activator activity hormone activity molecular function regulator activity neuropeptide hormone activity signaling receptor regulator activity receptor ligand activity G protein-coupled receptor binding neuropeptide receptor binding	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell communication G protein-coupled receptor signaling pathway cellular process signal transduction neuropeptide signaling pathway heart process multicellular organismal process system process cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell communication G protein-coupled receptor signaling pathway cellular process signal transduction neuropeptide signaling pathway heart process multicellular organismal process system process regulation of heart contraction regulation of system process positive regulation of biological process positive regulation of heart rate positive regulation of blood circulation positive regulation of heart contraction circulatory system process regulation of blood circulation positive regulation of multicellular organismal process regulation of multicellular organismal process regulation of biological quality heart contraction blood circulation regulation of heart rate regulation of blood pressure regulation of catalytic activity negative regulation of biological process negative regulation of catalytic activity regulation of signal transduction regulation of transferase activity regulation of MAP kinase activity intracellular signal transduction negative regulation of cellular metabolic process regulation of primary metabolic process negative regulation of kinase activity negative regulation of transferase activity negative regulation of JNK cascade regulation of phosphate metabolic process JNK cascade phosphate-containing compound metabolic process intracellular signaling cassette negative regulation of protein modification process phosphorus metabolic process protein modification process negative regulation of protein metabolic process protein phosphorylation phosphorylation cellular metabolic process regulation of protein metabolic process negative regulation of metabolic process regulation of JNK cascade regulation of cellular metabolic process primary metabolic process regulation of MAPK cascade regulation of molecular function regulation of kinase activity regulation of response to stimulus negative regulation of protein phosphorylation regulation of protein serine/threonine kinase activity macromolecule modification regulation of phosphorus metabolic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of protein modification process regulation of protein phosphorylation negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of phosphate metabolic process negative regulation of cell communication regulation of intracellular signal transduction negative regulation of protein serine/threonine kinase activity negative regulation of cellular process protein metabolic process negative regulation of JUN kinase activity negative regulation of macromolecule metabolic process regulation of signaling negative regulation of response to stimulus negative regulation of molecular function negative regulation of MAP kinase activity regulation of protein kinase activity regulation of macromolecule metabolic process negative regulation of protein kinase activity negative regulation of signal transduction negative regulation of phosphorus metabolic process regulation of JUN kinase activity MAPK cascade regulation of cell communication regulation of phosphorylation negative regulation of phosphorylation negative regulation of MAPK cascade multi-multicellular organism process reproductive process female pregnancy multi-organism reproductive process cellular biosynthetic process gene expression macromolecule biosynthetic process protein maturation protein folding biosynthetic process cGMP-mediated signaling transport sodium ion export across plasma membrane monoatomic ion transmembrane transport export from cell sodium ion transmembrane transport inorganic ion transmembrane transport export across plasma membrane establishment of localization metal ion transport inorganic cation transmembrane transport transmembrane transport monoatomic cation transmembrane transport localization monoatomic ion transport monoatomic cation transport sodium ion transport regulation of calcium ion transmembrane transporter activity regulation of calcium ion transport regulation of localization regulation of transmembrane transporter activity regulation of monoatomic ion transmembrane transport regulation of voltage-gated calcium channel activity calcium ion transport regulation of transporter activity regulation of calcium ion transmembrane transport regulation of metal ion transport regulation of monoatomic ion transmembrane transporter activity regulation of high voltage-gated calcium channel activity regulation of transport regulation of monoatomic ion transport regulation of cation channel activity regulation of transmembrane transport regulation of monoatomic cation transmembrane transport calcium ion transmembrane transport regulation of tube diameter regulation of tube size vascular process in circulatory system blood vessel diameter maintenance vasodilation regulation of anatomical structure size developmental process heart development heart valve development animal organ development aortic valve development circulatory system development multicellular organism development anatomical structure morphogenesis heart valve morphogenesis anatomical structure development semi-lunar valve development aortic valve morphogenesis system development cardiac muscle cell membrane repolarization membrane repolarization regulation of membrane repolarization atrial cardiac muscle cell membrane repolarization regulation of cardiac muscle cell membrane repolarization regulation of atrial cardiac muscle cell membrane repolarization regulation of membrane potential cardiac conduction system development cardiac muscle tissue development tissue development striated muscle tissue development muscle tissue development regulation of systemic arterial blood pressure negative regulation of systemic arterial blood pressure negative regulation of blood pressure ribose phosphate metabolic process nucleotide biosynthetic process carbohydrate derivative metabolic process purine ribonucleotide biosynthetic process cyclic nucleotide metabolic process nucleobase-containing compound metabolic process ribonucleotide biosynthetic process purine nucleotide metabolic process ribonucleotide metabolic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process cyclic nucleotide biosynthetic process small molecule metabolic process ribose phosphate biosynthetic process nucleoside phosphate metabolic process carbohydrate derivative biosynthetic process cyclic purine nucleotide metabolic process nucleotide metabolic process nucleobase-containing compound biosynthetic process purine-containing compound metabolic process cGMP metabolic process organophosphate metabolic process organophosphate biosynthetic process nucleoside phosphate biosynthetic process purine ribonucleotide metabolic process cGMP biosynthetic process purine nucleotide biosynthetic process regulation of calcium ion transmembrane transport via high voltage-gated calcium channel calcium ion transmembrane transport via high voltage-gated calcium channel positive regulation of cation transmembrane transport regulation of delayed rectifier potassium channel activity positive regulation of monoatomic ion transport positive regulation of monoatomic ion transmembrane transport regulation of potassium ion transmembrane transporter activity regulation of potassium ion transmembrane transport positive regulation of cation channel activity potassium ion transport regulation of potassium ion transport potassium ion transmembrane transport positive regulation of delayed rectifier potassium channel activity positive regulation of molecular function positive regulation of transmembrane transport positive regulation of cellular process positive regulation of potassium ion transport positive regulation of transport positive regulation of transporter activity positive regulation of potassium ion transmembrane transport positive regulation of ion transmembrane transporter activity positive regulation of voltage-gated potassium channel activity positive regulation of potassium ion transmembrane transporter activity cell surface receptor signaling pathway receptor guanylyl cyclase signaling pathway enzyme-linked receptor protein signaling pathway potassium ion export across plasma membrane positive regulation of potassium ion export across plasma membrane regulation of potassium ion export across plasma membrane positive regulation of cardiac muscle contraction cardiac muscle contraction striated muscle contraction positive regulation of striated muscle contraction regulation of cardiac muscle contraction muscle contraction muscle system process regulation of muscle system process regulation of striated muscle contraction regulation of muscle contraction positive regulation of muscle contraction response to mechanical stimulus response to abiotic stimulus response to external stimulus response to muscle stretch muscle hypertrophy striated muscle adaptation striated muscle hypertrophy muscle adaptation cardiac muscle adaptation response to stress cardiac muscle hypertrophy cardiac muscle hypertrophy in response to stress muscle hypertrophy in response to stress	somatodendritic compartment cell body perikaryon neuronal cell body cellular anatomical entity cell periphery extracellular matrix external encapsulating structure collagen-containing extracellular matrix intracellular anatomical structure cytoplasm protein-containing complex extracellular region extracellular space somatodendritic compartment cell body perikaryon neuronal cell body cellular anatomical entity cell periphery extracellular matrix external encapsulating structure collagen-containing extracellular matrix intracellular anatomical structure cytoplasm protein-containing complex extracellular region extracellular space cell projection

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR052612	Atrial Natriuretic Peptide Clearance Receptor	Family
A, B	IPR028082	Periplasmic binding protein-like I	Homologous Superfamily
A, B	IPR001170	Adenylyl cyclase class-4/guanylyl cyclase	Family
A, B	IPR001828	Receptor, ligand binding region	Domain
C [auth E]	IPR030480	Natriuretic peptide, conserved site	Conserved Site
C [auth E]	IPR050787	Natriuretic Peptide Hormone	Family
C [auth E]	IPR002407	Natriuretic peptide, atrial type	Family
C [auth E]	IPR000663	Natriuretic peptide	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: P17342	prostate cancer Weight Gain non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma type 2 diabetes mellitus atypical teratoid rhabdoid tumor congestive heart failure ductal breast carcinoma in situ hypertensive disorder large cell medulloblastoma lung carcinoma malignant pancreatic neoplasm osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia breast cancer prostate cancer Weight Gain non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma type 2 diabetes mellitus atypical teratoid rhabdoid tumor congestive heart failure ductal breast carcinoma in situ hypertensive disorder large cell medulloblastoma lung carcinoma malignant pancreatic neoplasm osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia breast cancer constipation disorder Emery-Dreifuss muscular dystrophy intellectual disability lung adenocarcinoma malignant colon neoplasm medulloblastoma ovarian cancer periodontitis psoriasis breast carcinoma cystic fibrosis invasive ductal breast carcinoma lung cancer malignant mesothelioma
C [auth E]	Pharos: P01160	atrial fibrillation, familial, 6 dilated cardiomyopathy congestive heart failure melanoma familial atrial fibrillation aortic valve insufficiency hypertensive disorder coronary stenosis patent ductus arteriosus renal hypertension atrial standstill 2 Urination Disorders granular cell carcinoma skin cancer cirrhosis of liver atrial fibrillation, familial, 6 dilated cardiomyopathy congestive heart failure melanoma familial atrial fibrillation aortic valve insufficiency hypertensive disorder coronary stenosis patent ductus arteriosus renal hypertension atrial standstill 2 Urination Disorders granular cell carcinoma skin cancer cirrhosis of liver adenocarcinoma prostate cancer skin neoplasm atrial standstill ureteral obstruction cardiomyopathy myocardial infarction tubular adenocarcinoma lung benign neoplasm malignant ependymoma cribriform carcinoma myocardial ischemia heart failure psoriasis hypotensive disorder small cell lung carcinoma atypical teratoid rhabdoid tumor type 2 diabetes mellitus coronary artery disease cribriform carcinoma of breast acute kidney failure atrial fibrillation congenital diaphragmatic hernia medulloblastoma cutaneous melanoma ovarian cancer dilated cardiomyopathy 1A glioblastoma heart disease atrial fibrillation, familial, 1 small cell carcinoma large cell medulloblastoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.