1YP2
Crystal structure of potato tuber ADP-glucose pyrophosphorylase
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8034826 | 3001804 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Nucleotide-diphospho-sugar transferases | 8034827 | 3000077 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8034826 | 3001804 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Nucleotide-diphospho-sugar transferases | 8034827 | 3000077 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Nucleotide-diphospho-sugar transferases | 8034827 | 3000077 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8034826 | 3001804 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Nucleotide-diphospho-sugar transferases | 8034827 | 3000077 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Trimeric LpxA-like enzymes | 8034826 | 3001804 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Hexapep_2_1 | e1yp2A1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: Hexapep_2_1 | ECOD (1.6) |
A | NTP_transferase | e1yp2A2 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: NTP_transferase | ECOD (1.6) |
C | Hexapep_2_1 | e1yp2C1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: Hexapep_2_1 | ECOD (1.6) |
C | NTP_transferase | e1yp2C2 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: NTP_transferase | ECOD (1.6) |
D | Hexapep_2_1 | e1yp2D1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: Hexapep_2_1 | ECOD (1.6) |
D | NTP_transferase | e1yp2D2 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: NTP_transferase | ECOD (1.6) |
B | Hexapep_2_1 | e1yp2B1 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: Hexapep_2_1 | ECOD (1.6) |
B | NTP_transferase | e1yp2B2 | A: a/b three-layered sandwiches | X: Nucleotide-diphospho-sugar transferases (From Topology) | H: Nucleotide-diphospho-sugar transferases (From Topology) | T: Nucleotide-diphospho-sugar transferases | F: NTP_transferase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
A | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
C | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
C | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
D | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
D | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
B | 3.90.550.10 | Alpha Beta | Alpha-Beta Complex | Spore Coat Polysaccharide Biosynthesis Protein SpsA | Chain A | CATH (4.3.0) |
B | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011831 | Glucose-1-phosphate adenylyltransferase | Family | |
IPR005836 | ADP-glucose pyrophosphorylase, conserved site | Conserved Site | |
IPR011004 | Trimeric LpxA-like superfamily | Homologous Superfamily | |
IPR005835 | Nucleotidyl transferase domain | Domain | |
IPR029044 | Nucleotide-diphospho-sugar transferases | Homologous Superfamily |