1ZGH
Methionyl-tRNA formyltransferase from Clostridium thermocellum
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1zgha1 | All beta proteins | FMT C-terminal domain-like | FMT C-terminal domain-like | Post formyltransferase domain | Methionyl-tRNAfmet formyltransferase, C-terminal domain | (Acetivibrio thermocellus ATCC 27405 ) [TaxId: 203119 ], | SCOPe (2.08) |
A | d1zgha2 | Alpha and beta proteins (a/b) | Formyltransferase | Formyltransferase | Formyltransferase | Methionyl-tRNAfmet formyltransferase | (Acetivibrio thermocellus ATCC 27405 ) [TaxId: 203119 ], | SCOPe (2.08) |
A | d1zgha3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Acetivibrio thermocellus ATCC 27405 ) [TaxId: 203119 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Methionyl-tRNA formyltransferase-like | 8044607 | 4000133 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Formyltransferase | 8044608 | 3000030 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | FMT C-terminal domain-like | 8044609 | 3000015 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | FMT_core_like_1 | e1zghA1 | A: beta barrels | X: FMT C-terminal domain-like | H: FMT C-terminal domain-related (From Topology) | T: FMT C-terminal domain-related | F: FMT_core_like_1 | ECOD (1.6) |
A | Formyl_trans_N | e1zghA2 | A: a/b three-layered sandwiches | X: Formyltransferase (From Topology) | H: Formyltransferase (From Topology) | T: Formyltransferase | F: Formyl_trans_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.170 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Formyl transferase, N-terminal domain | CATH (4.3.0) |
A | 3.10.25.20 | Alpha Beta | Roll | Methionyl-tRNA Fmet Formyltransferase | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21553 | Methionyl-tRNA formyltransferase, C-terminal domain (Formyl_trans_C_2) | Methionyl-tRNA formyltransferase, C-terminal domain | This domain is found at the C-terminal end of Methionyl-tRNA formyltransferase from Acetivibrio thermocellus and similar bacterial sequences. This domain is usually found associated with Pfam:PF00551. | Domain | |
PF00551 | Formyl transferase (Formyl_trans_N) | Formyl transferase | This family includes the following members. Glycinamide ribonucleotide transformylase catalyses the third step in de novo purine biosynthesis, the transfer of a formyl group to 5'-phosphoribosylglycinamide. Formyltetrahydrofolate deformylase produces ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Methionyl-tRNA formyltransferase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002376 | Formyl transferase, N-terminal | Domain | |
IPR036477 | Formyl transferase, N-terminal domain superfamily | Homologous Superfamily | |
IPR011034 | Formyl transferase-like, C-terminal domain superfamily | Homologous Superfamily | |
IPR049355 | Methionyl-tRNA formyltransferase-like, C-terminal domain | Domain |