1ZQ3
NMR Solution Structure of the Bicoid Homeodomain Bound to the Consensus DNA Binding Site TAATCC
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth P] | d1zq3p1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | Homeodomain-like | Homeodomain | Homeotic bicoid protein | fruit fly (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
C [auth P] | d1zq3p2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | fruit fly (Drosophila melanogaster ) [TaxId: 7227 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth P] | SCOP2 Family | Homeodomain | 8002354 | 4000291 | SCOP2 (2022-06-29) |
C [auth P] | SCOP2 Superfamily | Homeodomain-like | 8057592 | 3000001 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth P] | Homeobox | e1zq3P1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Homeobox | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth P] | 1.10.10.60 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Homeodomain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth P] | PF00046 | Homeodomain (Homeodomain) | Homeodomain | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth P] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
C [auth P] | IPR017970 | Homeobox, conserved site | Conserved Site |
C [auth P] | IPR001356 | Homeodomain | Domain |