Annotations: 2BKC

The X-ray structure of the H43G Listeria innocua Dps mutant

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2bkca1	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	Dodecameric ferritin homolog	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
B	d2bkcb_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
D	d2bkcd_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
E	d2bkce_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
F	d2bkcf_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
G	d2bkcg_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
H	d2bkch_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
I	d2bkci_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
M	d2bkcm_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
P	d2bkcp_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
Q	d2bkcq_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
R	d2bkcr_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
S	d2bkcs_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
T	d2bkct_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
U	d2bkcu_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
X [auth Y]	d2bkcy_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
W [auth X]	d2bkcx_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
V	d2bkcv_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
O	d2bkco_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
N	d2bkcn_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
L	d2bkcl_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
K	d2bkck_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
J	d2bkcj_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)
C	d2bkcc_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Listeria innocua ) [TaxId: 1642 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
X [auth Y]	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
W [auth X]	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8037003	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Ferritin	e2bkcA1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
B	Ferritin	e2bkcB1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
D	Ferritin	e2bkcD1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
E	Ferritin	e2bkcE1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
F	Ferritin	e2bkcF1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
G	Ferritin	e2bkcG1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
H	Ferritin	e2bkcH1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
I	Ferritin	e2bkcI1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
M	Ferritin	e2bkcM1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
P	Ferritin	e2bkcP1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
Q	Ferritin	e2bkcQ1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
R	Ferritin	e2bkcR1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
S	Ferritin	e2bkcS1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
T	Ferritin	e2bkcT1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
U	Ferritin	e2bkcU1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
X [auth Y]	Ferritin	e2bkcY1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
W [auth X]	Ferritin	e2bkcX1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
V	Ferritin	e2bkcV1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
O	Ferritin	e2bkcO1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
N	Ferritin	e2bkcN1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
L	Ferritin	e2bkcL1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
K	Ferritin	e2bkcK1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
J	Ferritin	e2bkcJ1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)
C	Ferritin	e2bkcC1	A: alpha arrays	X: Urease, gamma-subunit	H: Flavivirus capsid protein C	T: Flavivirus capsid protein C	F: Ferritin	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
B	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
D	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
E	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
F	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
G	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
H	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
I	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
M	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
P	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
Q	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
R	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
S	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
T	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
U	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
X [auth Y]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
W [auth X]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
V	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
O	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
N	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
L	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
K	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
J	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
C	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W [auth X], X [auth Y]	NON-HEME IRON-CONTAINING FERRITIN	oxidoreductase activity, acting on metal ions oxidoreductase activity catalytic activity cation binding ferric iron binding transition metal ion binding iron ion binding ion binding binding metal ion binding small molecule binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W [auth X], X [auth Y]	IPR012347	Ferritin-like	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W [auth X], X [auth Y]	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W [auth X], X [auth Y]	IPR002177	DNA-binding protein Dps	Family
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W [auth X], X [auth Y]	IPR008331	Ferritin/DPS domain	Domain
A, B, C, D, E, A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W [auth X], X [auth Y]	IPR023188	DNA-binding protein Dps, conserved site	Conserved Site