2DKV
Crystal structure of class I chitinase from Oryza sativa L. japonica
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glyco_hydro_19 | e2dkvA1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Glyco_hydro_19 | ECOD (1.6) |
A | Chitin_bind_1 | e2dkvA2 | A: few secondary structure elements | X: omega toxin-like | H: omega toxin-related | T: Plant lectins/antimicrobial peptides | F: Chitin_bind_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.60.10 | Alpha Beta | 2-Layer Sandwich | Wheat Germ Agglutinin (Isolectin 2) | domain 1 | CATH (4.3.0) |
A | 1.10.530.10 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) | |
A | 3.30.20.10 | Alpha Beta | 2-Layer Sandwich | Endochitinase | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00182 | Chitinase class I (Glyco_hydro_19) | Chitinase class I | Domain | ||
PF00187 | Chitin recognition protein (Chitin_bind_1) | Chitin recognition protein | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018371 | Chitin-binding, type 1, conserved site | Conserved Site | |
IPR036861 | Endochitinase-like superfamily | Homologous Superfamily | |
IPR023346 | Lysozyme-like domain superfamily | Homologous Superfamily | |
IPR001002 | Chitin-binding, type 1 | Domain | |
IPR016283 | Glycoside hydrolase, family 19 | Family | |
IPR000726 | Glycoside hydrolase, family 19, catalytic | Domain |