2N04 | pdb_00002n04

Solution Structure of the phosphorylated N-terminal region of Human Cysteine String Protein (CSP)

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e2n04A1	A: a/b three-layered sandwiches	X: MocoBD/DmpA-related	H: MocoBD/DmpA-related	T: Retrovirus capsid protein-C	F:	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.287.110	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	DnaJ domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00226	DnaJ domain (DnaJ)	DnaJ domain	DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are conf ...	DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	DnaJ homolog subfamily C member 5	protein binding binding ATP-dependent protein binding	protein folding biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation regulation of biological process neuron apoptotic process regulation of cellular process negative regulation of neuron apoptotic process protein folding biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation regulation of biological process neuron apoptotic process regulation of cellular process negative regulation of neuron apoptotic process negative regulation of programmed cell death regulation of apoptotic process biological regulation negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death regulation of neuron apoptotic process localization regulated exocytosis secretion by cell exocytosis transport secretion export from cell establishment of localization vesicle-mediated transport cellular localization signaling synaptic vesicle cycle synaptic vesicle exocytosis cell communication vesicle-mediated transport in synapse synaptic signaling signal release establishment of localization in cell trans-synaptic signaling neurotransmitter secretion cell-cell signaling neurotransmitter transport chemical synaptic transmission signal release from synapse anterograde trans-synaptic signaling regulation of localization regulation of transport regulation of synaptic vesicle cycle regulation of vesicle-mediated transport	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane intracellular vesicle endomembrane system specific granule membrane cytoplasmic vesicle membrane bounding membrane of organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane intracellular vesicle endomembrane system specific granule membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle secretory granule secretory vesicle vesicle organelle membrane secretory granule membrane specific granule pigment granule melanosome lytic vacuole lysosome vacuolar membrane azurophil granule vacuole lytic vacuole membrane lysosomal membrane primary lysosome azurophil granule membrane cytosol cell periphery plasma membrane presynapse synapse cell junction clathrin-sculpted gamma-aminobutyric acid transport vesicle clathrin-sculpted vesicle clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane coated vesicle membrane clathrin-coated vesicle coated vesicle clathrin-coated vesicle membrane neuromuscular junction transport vesicle membrane synaptic vesicle synaptic vesicle membrane transport vesicle exocytic vesicle membrane exocytic vesicle chromaffin granule membrane chromaffin granule

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001623	DnaJ domain	Domain
A	IPR051434	DnaJ homolog subfamily C member 5	Family
A	IPR018253	DnaJ domain, conserved site	Conserved Site
A	IPR036869	Chaperone J-domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q9H3Z4	neuronal ceroid lipofuscinosis 4B neuronal ceroid lipofuscinosis abdominal aortic aneurysm atypical teratoid rhabdoid tumor inborn errors of metabolism malignant ependymoma neurodegenerative disease osteosarcoma primitive neuroectodermal tumor astrocytic tumor benign breast phyllodes tumor large cell medulloblastoma malignant glioma ovarian cancer subependymal giant cell astrocytoma neuronal ceroid lipofuscinosis 4B neuronal ceroid lipofuscinosis abdominal aortic aneurysm atypical teratoid rhabdoid tumor inborn errors of metabolism malignant ependymoma neurodegenerative disease osteosarcoma primitive neuroectodermal tumor astrocytic tumor benign breast phyllodes tumor large cell medulloblastoma malignant glioma ovarian cancer subependymal giant cell astrocytoma Ataxias, Hereditary glioblastoma lysosomal storage disease medulloblastoma pilocytic astrocytoma

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A	SEP	Parent Component: SER RESID: AA0037 PSI-MOD : O-phospho-L-serine MOD:00046

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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