Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad2nv2a_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Gd2nv2g_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Id2nv2i_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Kd2nv2k_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Md2nv2m_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Od2nv2o_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Qd2nv2q_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Sd2nv2s_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Ud2nv2u_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Cd2nv2c_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Ed2nv2e_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Wd2nv2w_ Alpha and beta proteins (a/b) TIM beta/alpha-barrel Ribulose-phoshate binding barrel PdxS-like automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Bd2nv2b_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Dd2nv2d_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Fd2nv2f_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Hd2nv2h_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Jd2nv2j_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Ld2nv2l_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Nd2nv2n_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Pd2nv2p_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Rd2nv2r_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Td2nv2t_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Vd2nv2v_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)
Xd2nv2x_ Alpha and beta proteins (a/b) Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) automated matches (Bacillus subtilis ) [TaxId: 1423 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
KSCOP2 FamilyPdxS-like 8085955 4002281 SCOP2 (2022-06-29)
KSCOP2 SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2 (2022-06-29)
MSCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
USCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyRibulose-phoshate binding barrel 8085956 3000216 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyClass I glutamine amidotransferase-like 8043266 3001405 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASOR_SNZe2nv2A1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
GSOR_SNZe2nv2G1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
ISOR_SNZe2nv2I1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
KSOR_SNZe2nv2K1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
MSOR_SNZe2nv2M1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
OSOR_SNZe2nv2O1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
QSOR_SNZe2nv2Q1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
SSOR_SNZe2nv2S1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
USOR_SNZe2nv2U1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
CSOR_SNZe2nv2C1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
ESOR_SNZe2nv2E1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
WSOR_SNZe2nv2W1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: SOR_SNZECOD (1.6)
BGATasee2nv2B1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
DGATasee2nv2D1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
FGATasee2nv2F1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
HGATasee2nv2H1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
JGATasee2nv2J1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
LGATasee2nv2L1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
NGATasee2nv2N1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
PGATasee2nv2P1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
RGATasee2nv2R1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
TGATasee2nv2T1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
VGATasee2nv2V1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)
XGATasee2nv2X1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Class I glutamine amidotransferase-likeF: GATaseECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
G3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
I3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
K3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
M3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
O3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
Q3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
S3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
U3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
C3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
E3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
W3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
B3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
D3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
F3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
H3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
J3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
L3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
N3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
P3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
R3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
T3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
V3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)
X3.40.50.880 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Class I glutamine amidotransferase (GATase) domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E, G, I
PF01680SOR/SNZ family (SOR_SNZ)SOR/SNZ familyMembers of this family are enzymes involved in a new pathway of pyridoxine/pyridoxal 5-phosphate biosynthesis [1]. This family was formerly known as UPF0019.Domain
B, D, F, H, J
PF00117Glutamine amidotransferase class-I (GATase)Glutamine amidotransferase class-I- Domain
B, D, F, H, J
PF01174SNO glutamine amidotransferase family (SNO)SNO glutamine amidotransferase familyThis family and its amidotransferase domain was first described in [1]. It is predicted that members of this family are involved in the pyridoxine biosynthetic pathway, based on the proximity and co-regulation of the corresponding genes and physical ...This family and its amidotransferase domain was first described in [1]. It is predicted that members of this family are involved in the pyridoxine biosynthetic pathway, based on the proximity and co-regulation of the corresponding genes and physical interaction between the members of Pfam:PF01174 and Pfam:PF01680 [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E, G, I
Pyridoxal biosynthesis lyase pdxS -
B, D, F, H, J
Glutamine amidotransferase subunit pdxT

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C, E, G, I
IPR011060Ribulose-phosphate binding barrelHomologous Superfamily
A, C, E, G, I
IPR001852Pyridoxal 5'-phosphate synthase subunit PdxS/SNZFamily
A, C, E, G, I
IPR013785Aldolase-type TIM barrelHomologous Superfamily
A, C, E, G, I
IPR033755PdxS/SNZ N-terminal domainDomain
B, D, F, H, J
IPR029062Class I glutamine amidotransferase-likeHomologous Superfamily
B, D, F, H, J
IPR002161Pyridoxal 5'-phosphate synthase subunit PdxT/SNOFamily
B, D, F, H, J
IPR021196PdxT/SNO family, conserved siteConserved Site