2PIL
Crystallographic Structure of Phosphorylated Pilin from Neisseria: Phosphoserine Sites Modify Type IV Pilus Surface Chemistry
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: MemProtMD
- Protein Modification Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2pila_ | Alpha and beta proteins (a+b) | Pili subunits | Pili subunits | Pilin | Pilin Gc | (Neisseria gonorrhoeae ) [TaxId: 485 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.700.10 | Alpha Beta | 2-Layer Sandwich | Glycoprotein, Type 4 Pilin | Glycoprotein, Type 4 Pilin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07963 | Prokaryotic N-terminal methylation motif (N_methyl) | Prokaryotic N-terminal methylation motif | - | Motif | |
PF00114 | Pilin (bacterial filament) (Pilin) | Pilin (bacterial filament) | Proteins with only the short N-terminal methylation site are not separated from the noise. The Prosite pattern detects those better. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
TYPE 4 PILIN | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012902 | Prokaryotic N-terminal methylation site | PTM | |
IPR001082 | Fimbrial protein pilin | Family | |
IPR050470 | Type IV Pilus and Type II Secretion System Core | Family | |
IPR045584 | Pilin-like | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Bitopic proteins | Type IV pilin | Bacterial pilin |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |