2PZV | pdb_00002pzv

Crystal Structure of Ketosteroid Isomerase D40N from Pseudomonas Putida (pksi) with bound Phenol

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2pzva_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
B	d2pzvb_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
D	d2pzvd_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)
C	d2pzvc_	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Ketosteroid isomerase-like	Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI	(Pseudomonas putida ) [TaxId: 303 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	NTF2-like	8034008	3000472	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	NTF2-like	8034008	3000472	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	NTF2-like	8034008	3000472	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	NTF2-like	8034008	3000472	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Biopterin_H	e2pzvA1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (develop294)
B	Biopterin_H	e2pzvB1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (develop294)
D	Biopterin_H	e2pzvD1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (develop294)
C	Biopterin_H	e2pzvC1	A: alpha bundles	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
B	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
D	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
C	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Steroid Delta-isomerase	isomerase activity intramolecular oxidoreductase activity, transposing C=C bonds intramolecular oxidoreductase activity catalytic activity steroid Delta-isomerase activity	steroid metabolic process primary metabolic process metabolic process cellular process lipid metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR032710	NTF2-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR039256	Ketosteroid isomerase	Family
A, B, C, D	IPR037401	SnoaL-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.