2UZ9

Human guanine deaminase (guaD) in complex with zinc and its product Xanthine.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2uz9a1	All beta proteins	Composite domain of metallo-dependent hydrolases	Composite domain of metallo-dependent hydrolases	SAH/MTA deaminase-like	Guanine deaminase	HUMAN (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d2uz9a2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Metallo-dependent hydrolases	SAH/MTA deaminase-like	Guanine deaminase	HUMAN (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	SAH/MTA deaminase-like	8024654	4002800	SCOP2 (2022-06-29)
A	SCOP2 Family	SAH/MTA deaminase-like	8024655	4002846	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Composite domain of metallo-dependent hydrolases	8037033	3000176	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Metallo-dependent hydrolases	8037034	3000428	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	GDEase	e2uz9A1	A: beta sandwiches	X: Composite domain of metallo-dependent hydrolases (From Topology)	H: Composite domain of metallo-dependent hydrolases (From Topology)	T: Composite domain of metallo-dependent hydrolases	F: GDEase	ECOD (1.6)
A	Amidohydro_1_N	e2uz9A2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Amidohydro_1_N	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.40.10	Mainly Beta	Roll	Urease, subunit C	domain 1	CATH (4.3.0)
A	3.20.20.140	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Metal-dependent hydrolases	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01979	Amidohydrolase family (Amidohydro_1)	Amidohydrolase family	This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ...	This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source [2]. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyse the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit [3]. Dihydroorotases (EC:3.5.2.3) are also included [4-5].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	GUANINE DEAMINASE	guanine deaminase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines hydrolase activity catalytic activity deaminase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding	catabolic process amide catabolic process metabolic process cellular process amide metabolic process nucleobase-containing compound metabolic process guanine metabolic process purine nucleobase metabolic process nucleobase-containing small molecule metabolic process nucleobase metabolic process small molecule metabolic process primary metabolic process purine-containing compound metabolic process ribose phosphate metabolic process catabolic process amide catabolic process metabolic process cellular process amide metabolic process nucleobase-containing compound metabolic process guanine metabolic process purine nucleobase metabolic process nucleobase-containing small molecule metabolic process nucleobase metabolic process small molecule metabolic process primary metabolic process purine-containing compound metabolic process ribose phosphate metabolic process ribonucleotide catabolic process organophosphate catabolic process carbohydrate derivative metabolic process nucleoside phosphate catabolic process purine ribonucleoside monophosphate catabolic process purine nucleoside monophosphate catabolic process purine ribonucleoside monophosphate metabolic process purine nucleotide metabolic process ribonucleotide metabolic process ribonucleoside monophosphate metabolic process purine nucleoside monophosphate metabolic process phosphate-containing compound metabolic process GMP metabolic process ribonucleoside monophosphate catabolic process purine ribonucleotide catabolic process phosphorus metabolic process nucleoside monophosphate metabolic process nucleotide catabolic process nucleoside phosphate metabolic process purine nucleotide catabolic process carbohydrate derivative catabolic process nucleoside monophosphate catabolic process purine-containing compound catabolic process nucleotide metabolic process GMP catabolic process nucleobase-containing compound catabolic process organophosphate metabolic process purine ribonucleotide metabolic process purine nucleobase catabolic process guanine catabolic process nucleobase catabolic process developmental process multicellular organism development multicellular organismal process anatomical structure development nervous system development system development glycosyl compound metabolic process deoxyribonucleoside metabolic process purine nucleoside catabolic process purine deoxyribonucleoside catabolic process deoxyguanosine catabolic process purine deoxyribonucleoside metabolic process glycosyl compound catabolic process nucleoside metabolic process nucleobase-containing small molecule catabolic process nucleoside catabolic process deoxyribonucleoside catabolic process small molecule catabolic process deoxyguanosine metabolic process purine nucleoside metabolic process allantoin metabolic process dGMP catabolic process purine deoxyribonucleoside monophosphate catabolic process deoxyribonucleoside monophosphate catabolic process deoxyribonucleotide catabolic process deoxyribose phosphate catabolic process deoxyribonucleotide metabolic process purine deoxyribonucleotide catabolic process 2'-deoxyribonucleotide metabolic process purine deoxyribonucleoside monophosphate metabolic process deoxyribose phosphate metabolic process deoxyribonucleoside monophosphate metabolic process dGMP metabolic process purine deoxyribonucleotide metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR014311	Guanine deaminase	Family
A	IPR006680	Amidohydrolase-related	Domain
A	IPR011059	Metal-dependent hydrolase, composite domain superfamily	Homologous Superfamily
A	IPR032466	Metal-dependent hydrolase	Homologous Superfamily
A	IPR051607	Metallo-dependent Hydrolases	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q9Y2T3	sarcomatoid carcinoma Mammary Neoplasms, Experimental carcinoma medulloblastoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm pituitary cancer Alzheimer disease astrocytic tumor gastric carcinoma interstitial cystitis malignant glioma mammary neoplasms, animal metabolic syndrome X oligodendroglioma sarcomatoid carcinoma Mammary Neoplasms, Experimental carcinoma medulloblastoma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous neoplasm pituitary cancer Alzheimer disease astrocytic tumor gastric carcinoma interstitial cystitis malignant glioma mammary neoplasms, animal metabolic syndrome X oligodendroglioma Pick disease primitive neuroectodermal tumor ulcerative colitis atypical teratoid rhabdoid tumor chronic obstructive pulmonary disease glioblastoma large cell medulloblastoma malignant pancreatic neoplasm nasopharyngeal carcinoma pancreatic ductal adenocarcinoma pilocytic astrocytoma psoriasis undifferentiated carcinoma drug-induced liver injury head and neck cancer malignant ependymoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.