2UZP | pdb_00002uzp

Crystal structure of the C2 domain of human protein kinase C gamma.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2uzpb_	All beta proteins	C2 domain-like	C2 domain (Calcium/lipid-binding domain, CaLB)	Synaptotagmin-like (S variant)	automated matches	HUMAN (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C	d2uzpc_	All beta proteins	C2 domain-like	C2 domain (Calcium/lipid-binding domain, CaLB)	Synaptotagmin-like (S variant)	automated matches	HUMAN (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d2uzpa_	All beta proteins	C2 domain-like	C2 domain (Calcium/lipid-binding domain, CaLB)	Synaptotagmin-like (S variant)	automated matches	HUMAN (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	C2 domain (calcium/lipid-binding domain, calb)	8072575	3000965	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	C2 domain (calcium/lipid-binding domain, calb)	8072575	3000965	SCOP2B (2022-06-29)
A	SCOP2 Family	Synaptotagmin-like (S variant)	8072574	4002234	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	C2 domain (calcium/lipid-binding domain, calb)	8072575	3000965	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Biopterin_H	e2uzpB1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
C	Biopterin_H	e2uzpC1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: Nudix	F: Biopterin_H	ECOD (v294.1)
A	Phospholip_A2_1	e2uzpA1	A: a/b three-layered sandwiches	X: Profilin-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Phospholip_A2_1	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.60.40.150	Mainly Beta	Sandwich	Immunoglobulin-like	C2 domain	CATH (4.3.0)
C	2.60.40.150	Mainly Beta	Sandwich	Immunoglobulin-like	C2 domain	CATH (4.3.0)
A	2.60.40.150	Mainly Beta	Sandwich	Immunoglobulin-like	C2 domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF00168	C2 domain (C2)	C2 domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	PROTEIN KINASE C GAMMA TYPE	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding catalytic activity, acting on a protein kinase activity protein kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein serine/threonine kinase activity calcium,diacylglycerol-dependent serine/threonine kinase activity diacylglycerol-dependent serine/threonine kinase activity calcium-dependent protein serine/threonine kinase activity protein serine/threonine/tyrosine kinase activity protein serine kinase activity cation binding transition metal ion binding zinc ion binding metal ion binding	trans-synaptic signaling regulation of biological process regulation of signaling regulation of cellular process modulation of chemical synaptic transmission signaling biological regulation cell-cell signaling presynaptic modulation of chemical synaptic transmission chemical synaptic transmission cell communication synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling trans-synaptic signaling regulation of biological process regulation of signaling regulation of cellular process modulation of chemical synaptic transmission signaling biological regulation cell-cell signaling presynaptic modulation of chemical synaptic transmission chemical synaptic transmission cell communication synaptic signaling regulation of trans-synaptic signaling anterograde trans-synaptic signaling regulation of cell communication cellular process negative regulation of post-translational protein modification regulation of protein modification process negative regulation of biological process regulation of protein ubiquitination regulation of primary metabolic process protein ubiquitination negative regulation of protein modification process negative regulation of cellular process protein metabolic process negative regulation of protein ubiquitination regulation of protein modification by small protein conjugation or removal protein modification process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process negative regulation of protein modification by small protein conjugation or removal regulation of post-translational protein modification regulation of protein metabolic process negative regulation of metabolic process primary metabolic process regulation of macromolecule metabolic process macromolecule modification metabolic process macromolecule metabolic process post-translational protein modification regulation of metabolic process protein modification by small protein conjugation protein modification by small protein conjugation or removal response to angiotensin response to stimulus response to hormone response to chemical response to endogenous stimulus response to peptide hormone response to oxygen-containing compound response to nitrogen compound response to toxic substance import into cell regulation of localization regulation of cellular component organization transport regulation of transport regulation of phagocytosis regulation of vesicle-mediated transport establishment of localization vesicle-mediated transport cellular component organization localization phagocytosis cellular component organization or biogenesis endocytosis regulation of endocytosis behavior multicellular organismal process chemosensory behavior catabolic process macromolecule catabolic process negative regulation of protein catabolic process negative regulation of catabolic process proteasomal protein catabolic process protein catabolic process regulation of catabolic process negative regulation of proteasomal protein catabolic process regulation of proteasomal protein catabolic process regulation of protein catabolic process cellular response to stimulus phospholipase C-activating G protein-coupled receptor signaling pathway G protein-coupled receptor signaling pathway signal transduction response to morphine response to isoquinoline alkaloid response to alkaloid mismatch repair positive regulation of biological process regulation of cellular response to stress positive regulation of mismatch repair positive regulation of response to stimulus nucleobase-containing compound metabolic process positive regulation of metabolic process positive regulation of DNA repair cellular response to stress response to stress regulation of response to stress positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process DNA repair DNA metabolic process nucleic acid metabolic process regulation of DNA repair positive regulation of DNA metabolic process regulation of response to stimulus DNA damage response regulation of mismatch repair regulation of DNA metabolic process cellular localization regulated exocytosis synaptic vesicle cycle synaptic vesicle exocytosis vesicle-mediated transport in synapse regulation of regulated secretory pathway regulation of secretion by cell secretion by cell signal release establishment of localization in cell neurotransmitter secretion secretion regulation of neurotransmitter transport regulation of synaptic vesicle exocytosis export from cell neurotransmitter transport regulation of secretion signal release from synapse exocytosis regulation of neurotransmitter secretion regulation of exocytosis response to nutrient levels regulation of response to nutrient levels regulation of response to food response to food multicellular organismal response to stress response to pain rhythmic process circadian rhythm regulation of circadian rhythm neuron apoptotic process negative regulation of neuron apoptotic process negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death regulation of neuron apoptotic process response to psychosocial stress synaptic signaling via neuropeptide system process learning or memory nervous system process cognition intracellular signal transduction developmental process multicellular organism development nerve development innervation anatomical structure development nervous system development system development positive regulation of cell communication long-term synaptic potentiation regulation of biological quality regulation of synaptic plasticity positive regulation of synaptic transmission positive regulation of signaling	cell-cell junction cellular anatomical structure anchoring junction cell junction intracellular anatomical structure cytoplasm cytosol somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection axon cell-cell junction cellular anatomical structure anchoring junction cell junction intracellular anatomical structure cytoplasm cytosol somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection axon synapse axon terminus presynapse distal axon calyx of Held neuron projection terminus perinuclear region of cytoplasm cell periphery membrane plasma membrane plasma membrane region synaptic membrane presynaptic cytosol postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization organelle asymmetric synapse membrane-bounded organelle intracellular organelle nucleus intracellular membrane-bounded organelle postsynaptic cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR020454	Diacylglycerol/phorbol-ester binding	Domain
A, B, C	IPR000719	Protein kinase domain	Domain
A, B, C	IPR017892	Protein kinase, C-terminal	Domain
A, B, C	IPR017441	Protein kinase, ATP binding site	Binding Site
A, B, C	IPR000008	C2 domain	Domain
A, B, C	IPR000961	AGC-kinase, C-terminal	Domain
A, B, C	IPR014375	Protein kinase C, alpha/beta/gamma types	Family
A, B, C	IPR002219	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Domain
A, B, C	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
A, B, C	IPR035892	C2 domain superfamily	Homologous Superfamily
A, B, C	IPR046349	C1-like domain superfamily	Homologous Superfamily
A, B, C	IPR008271	Serine/threonine-protein kinase, active site	Active Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C	Pharos: P05129	spinocerebellar ataxia type 14 autosomal dominant cerebellar ataxia intellectual disability trigeminal neuralgia Hyperalgesia medulloblastoma neurodegenerative disease primitive neuroectodermal tumor spinocerebellar ataxia type 2 actinic keratosis spinocerebellar ataxia type 6 cerebellar ataxia testicular germ cell tumor glioblastoma malignant glioma spinocerebellar ataxia type 14 autosomal dominant cerebellar ataxia intellectual disability trigeminal neuralgia Hyperalgesia medulloblastoma neurodegenerative disease primitive neuroectodermal tumor spinocerebellar ataxia type 2 actinic keratosis spinocerebellar ataxia type 6 cerebellar ataxia testicular germ cell tumor glioblastoma malignant glioma oligodendroglioma spinocerebellar ataxia type 1 spinocerebellar ataxia type 4 spinocerebellar ataxia type 7 atypical teratoid rhabdoid tumor Charcot-Marie-Tooth disease hereditary ataxia large cell medulloblastoma pilocytic astrocytoma psoriasis spinocerebellar ataxia type 5 astrocytic tumor malignant ependymoma

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C	DSN	RESID: AA0195 , AA0624 PSI-MOD : D-serine (Ser) MOD:00202 , D-serine MOD:00891 , D-serine (Cys) MOD:00892 , 2-(L-cystein-S-yl)-D-serine MOD:01987

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.