Crystal structure of Glycogen Debranching enzyme TreX from Sulfolobus solfataricus
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | YonK | e2vncB2 | A: alpha bundles | X: DP domain | H: DP domain | T: DP domain | F: YonK | ECOD (develop294) |
| B | e2vncB4 | A: alpha bundles | X: Thioredoxin-like | H: Thioredoxin-like | T: Thioredoxin-like | F: | ECOD (develop294) | |
| A | AA_kinase | e2vncA1 | A: alpha bundles | X: Profilin-like | H: sensor domains | T: sensor domains | F: AA_kinase | ECOD (develop294) |
| A | e2vncA4 | A: alpha bundles | X: Fusion glycoprotein F2 | H: HTH | T: winged helix domain | F: | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| B | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| A | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011837 | Glycogen debranching enzyme, GlgX type | Family | |
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
| IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
| IPR006047 | Glycosyl hydrolase family 13, catalytic domain | Domain | |
| IPR044505 | Glycogen debranching enzyme GlgX/isoamylase, N-terminal Early set domain | Domain | |
| IPR013780 | Glycosyl hydrolase, all-beta | Homologous Superfamily | |
| IPR004193 | Glycoside hydrolase, family 13, N-terminal | Domain |














