crystal structure of PaaK1 in complex with ATP from Burkholderia cenocepacia
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Ank_2, Ank_4, Ank_5 | e2y27B4 | A: alpha bundles | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: Ank_2, Ank_4, Ank_5 | ECOD (develop294) |
| A | Radical_SAM | e2y27A2 | A: alpha bundles | X: Lipocalins/Streptavidin | H: Zn-dependent exopeptidases | T: Zn-dependent exopeptidases | F: Radical_SAM | ECOD (develop294) |
| A | Ank_2, Ank_4, Ank_5 | e2y27A4 | A: alpha bundles | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: Ank_2, Ank_4, Ank_5 | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.50.12780 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | ANL, N-terminal domain | CATH (4.3.0) |
| B | 3.30.300.30 | Alpha Beta | 2-Layer Sandwich | GMP Synthetase | Chain A, domain 3 | CATH (4.3.0) |
| A | 3.40.50.12780 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | ANL, N-terminal domain | CATH (4.3.0) |
| A | 3.30.300.30 | Alpha Beta | 2-Layer Sandwich | GMP Synthetase | Chain A, domain 3 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR051414 | Adenylate-forming_Reductase | Unknown | |
| IPR042099 | ANL, N-terminal domain | Homologous Superfamily | |
| IPR028154 | AMP-dependent ligase, C-terminal | Domain | |
| IPR045851 | AMP-binding enzyme domain superfamily | Homologous Superfamily | |
| IPR011880 | Phenylacetate-CoA ligase | Family | |
| IPR049623 | Phenylacetate--CoA ligase PaaK, proteobacteria/actinomycetes | Family | |
| IPR000873 | AMP-dependent synthetase/ligase domain | Domain |














