3A6Z
Crystal structure of Pseudomonas sp. MIS38 lipase (PML) in the open conformation following dialysis against Ca-free buffer
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth C] | Peptidase_M10_C | e3a6zC3 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Serralysin-like metalloprotease-C (From Topology) | T: Serralysin-like metalloprotease-C | F: Peptidase_M10_C | ECOD (1.6) |
B [auth C] | Peptidase_M10_C_like | e3a6zC4 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Serralysin-like metalloprotease-C (From Topology) | T: Serralysin-like metalloprotease-C | F: Peptidase_M10_C_like | ECOD (1.6) |
B [auth C] | Lipase_3 | e3a6zC2 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Lipase_3 | ECOD (1.6) |
A | Peptidase_M10_C | e3a6zA2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Serralysin-like metalloprotease-C (From Topology) | T: Serralysin-like metalloprotease-C | F: Peptidase_M10_C | ECOD (1.6) |
A | Peptidase_M10_C_like | e3a6zA3 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Serralysin-like metalloprotease-C (From Topology) | T: Serralysin-like metalloprotease-C | F: Peptidase_M10_C_like | ECOD (1.6) |
A | Lipase_3 | e3a6zA1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: Lipase_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth C] | 3.40.50.1820 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Alpha/Beta hydrolase fold, catalytic domain | CATH (4.3.0) |
A | 3.40.50.1820 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Alpha/Beta hydrolase fold, catalytic domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C] | PF00353 | RTX calcium-binding nonapeptide repeat (4 copies) (HemolysinCabind) | RTX calcium-binding nonapeptide repeat (4 copies) | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth C] | Lipase | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C] | IPR050557 | RTX toxin and mannuronan C5-epimerase | Family |
A, B [auth C] | IPR018511 | Hemolysin-type calcium-binding conserved site | Conserved Site |
A, B [auth C] | IPR001343 | RTX calcium-binding nonapeptide repeat | Repeat |
A, B [auth C] | IPR011049 | Serralysin-like metalloprotease, C-terminal | Homologous Superfamily |
A, B [auth C] | IPR029058 | Alpha/Beta hydrolase fold | Homologous Superfamily |