3DKE
Polar and non-polar cavities in phage T4 lysozyme
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | d3dkex_ | Alpha and beta proteins (a+b) | Lysozyme-like | Lysozyme-like | Phage lysozyme | Phage T4 lysozyme | (Tequatrovirus T4 ) [TaxId: 10665 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth X] | SCOP2B Superfamily | Lysozyme-like | 8033861 | 3001879 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth X] | Phage_lysozyme_2 | e3dkeX1 | A: a+b complex topology | X: Lysozyme-like (From Homology) | H: Lysozyme-like | T: Lysozyme-like | F: Phage_lysozyme_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth X] | 1.10.530.40 | Mainly Alpha | Orthogonal Bundle | Lysozyme | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth X] | PF00959 | Phage lysozyme (Phage_lysozyme) | Phage lysozyme | This family includes lambda phage lysozyme and E. coli endolysin. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth X] | IPR052619 | Bacteriophage lysozyme-like | Family |
A [auth X] | IPR001165 | T4-type lysozyme | Family |
A [auth X] | IPR034690 | Endolysin T4 type | Family |
A [auth X] | IPR002196 | Glycoside hydrolase, family 24 | Family |
A [auth X] | IPR023347 | Lysozyme domain superfamily | Homologous Superfamily |
A [auth X] | IPR023346 | Lysozyme-like domain superfamily | Homologous Superfamily |