3DTV

Crystal structure of arylmalonate decarboxylase

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	AroM	e3dtvA4	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: ATC-like	F: AroM	ECOD (1.6)
D	AroM	e3dtvD4	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: ATC-like	F: AroM	ECOD (1.6)
B	AroM	e3dtvB4	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: ATC-like	F: AroM	ECOD (1.6)
C	AroM	e3dtvC4	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: ATC-like	F: AroM	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.12500	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
D	3.40.50.12500	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
B	3.40.50.12500	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)
C	3.40.50.12500	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF17645	Arylmalonate decarboxylase (Amdase)	Arylmalonate decarboxylase	-	Family
D	PF17645	Arylmalonate decarboxylase (Amdase)	Arylmalonate decarboxylase	-	Family
B, C	PF17645	Arylmalonate decarboxylase (Amdase)	Arylmalonate decarboxylase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Arylmalonate decarboxylase	carboxy-lyase activity lyase activity arylmalonate decarboxylase activity catalytic activity carbon-carbon lyase activity	-	-
D	Arylmalonate decarboxylase	carboxy-lyase activity lyase activity arylmalonate decarboxylase activity catalytic activity carbon-carbon lyase activity	-	-
B, C	Arylmalonate decarboxylase	carboxy-lyase activity lyase activity arylmalonate decarboxylase activity catalytic activity carbon-carbon lyase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR053714	Isomerization and Racemization Enzyme Superfamily	Homologous Superfamily
A	IPR011060	Ribulose-phosphate binding barrel	Homologous Superfamily
A	IPR026286	Maleate isomerase/Arylmalonate decarboxylase	Family
D	IPR053714	Isomerization and Racemization Enzyme Superfamily	Homologous Superfamily
D	IPR011060	Ribulose-phosphate binding barrel	Homologous Superfamily
D	IPR026286	Maleate isomerase/Arylmalonate decarboxylase	Family
B, C	IPR053714	Isomerization and Racemization Enzyme Superfamily	Homologous Superfamily
B, C	IPR011060	Ribulose-phosphate binding barrel	Homologous Superfamily
B, C	IPR026286	Maleate isomerase/Arylmalonate decarboxylase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.