3EMO | pdb_00003emo

Crystal structure of transmembrane Hia 973-1098

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth A]SCOP2B SuperfamilyPili subunits 8042007 3000097 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyPili subunits 8042007 3000097 SCOP2B (2022-06-29)
A [auth C]SCOP2B SuperfamilyPili subunits 8042007 3000097 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth A]Glyco_hydro_35e3emoA1 A: alpha bundlesX: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunitH: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunitT: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunitF: Glyco_hydro_35ECOD (develop294)
C [auth B]Glyoxalasee3emoB3 A: alpha bundlesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: GlyoxalaseECOD (develop294)
A [auth C]Lipoprotein_1e3emoC2 A: alpha bundlesX: HAMP domainH: HAMP domainT: HAMP domainF: Lipoprotein_1ECOD (develop294)
A [auth C]2OG-FeII_Oxy_4e3emoC3 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: 2OG-FeII_Oxy_4ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth A]3.30.1300.30 Alpha Beta 2-Layer Sandwich Pantoate--beta-alanine Ligase Chain: A,domain 2CATH (4.3.0)
C [auth B]3.30.1300.30 Alpha Beta 2-Layer Sandwich Pantoate--beta-alanine Ligase Chain: A,domain 2CATH (4.3.0)
A [auth C]3.30.1300.30 Alpha Beta 2-Layer Sandwich Pantoate--beta-alanine Ligase Chain: A,domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C],
B [auth A],
C [auth B]		Hia (Adhesin)-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth C],
B [auth A],
C [auth B]		IPR040482Trimeric autotransporter adhesin, Trp ring domainDomain
A [auth C],
B [auth A],
C [auth B]		IPR008635Trimeric autotransporter adhesin YadA-like, stalk domainDomain
A [auth C],
B [auth A],
C [auth B]		IPR028230Trimeric autotransporter adhesin, tryptophan-ring motifDomain
A [auth C],
B [auth A],
C [auth B]		IPR037174Trimeric adhesinHomologous Superfamily
A [auth C],
B [auth A],
C [auth B]		IPR005594Trimeric autotransporter adhesin YadA-like, C-terminal membrane anchor domainDomain
A [auth C],
B [auth A],
C [auth B]		IPR024973ESPR domainDomain
A [auth C],
B [auth A],
C [auth B]		IPR054742Autotransporter adhesin NhhA, Trp-ring domainDomain
A [auth C],
B [auth A],
C [auth B]		IPR029275Trimeric autotransporter adhesin, putative GIN domainDomain
A [auth C],
B [auth A],
C [auth B]		IPR045584Pilin-likeHomologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMTransmembraneBeta-barrel transmembraneTrimeric autotransporter (n=12,S=12)Autotransporter-2 (AT-2)

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
MemProtMDAnnotated as membrane protein by MemProtMD