3G88 | pdb_00003g88

T. thermophilus 16S rRNA G527 methyltransferase in complex with AdoMet in space group P61


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyS-adenosyl-L-methionine-dependent methyltransferases 8074812 3000118 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyS-adenosyl-L-methionine-dependent methyltransferases 8074812 3000118 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGlyco_hydro_3e3g88A1 A: alpha bundlesX: Alpha-beta plaitsH: FAD-dependent thiol oxidaseT: FAD-dependent thiol oxidaseF: Glyco_hydro_3ECOD (develop294)
BRibosomal_L36e3g88B1 A: alpha bundlesX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: Ribosomal_L36ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.150 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Vaccinia Virus protein VP39CATH (4.3.0)
B3.40.50.150 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Vaccinia Virus protein VP39CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF02527rRNA small subunit methyltransferase G (GidB)rRNA small subunit methyltransferase G- Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
HIC Parent Component: HIS

RESIDAA0317

PSI-MOD :  1'-methyl-L-histidine MOD:00322