Cobra Venom Factor (CVF) in complex with human factor B
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| H [auth I] | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043500 | 3000902 | SCOP2B (2022-06-29) |
| H [auth I] | SCOP2B Superfamily | Trypsin-like serine proteases | 8042311 | 3000114 | SCOP2B (2022-06-29) |
| H [auth I] | SCOP2B Superfamily | vWA-like | 8042312 | 3000832 | SCOP2B (2022-06-29) |
| H [auth I] | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043505 | 3000902 | SCOP2B (2022-06-29) |
| H [auth I] | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043502 | 3000902 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043500 | 3000902 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Trypsin-like serine proteases | 8042311 | 3000114 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | vWA-like | 8042312 | 3000832 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043502 | 3000902 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Sushi/CCP/SCR domain | 8043505 | 3000902 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| H [auth I] | Trypsin_1 | e3hs0I9 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| H [auth I] | VWA | e3hs0I8 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: VWA | ECOD (1.6) |
| H [auth I] | Sushi | e3hs0I4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi | ECOD (1.6) |
| H [auth I] | Sushi_3 | e3hs0I3 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi_3 | ECOD (1.6) |
| H [auth I] | Sushi_1 | e3hs0I5 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi_1 | ECOD (1.6) |
| D | Trypsin_1 | e3hs0D4 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| D | VWA | e3hs0D5 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: VWA | ECOD (1.6) |
| D | Sushi | e3hs0D6 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi | ECOD (1.6) |
| D | Sushi_3 | e3hs0D3 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi_3 | ECOD (1.6) |
| D | Sushi_1 | e3hs0D7 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi_1 | ECOD (1.6) |
| G [auth H] | NTR | e3hs0H2 | A: beta barrels | X: OB-fold | H: TIMP-like (From Topology) | T: TIMP-like | F: NTR | ECOD (1.6) |
| G [auth H] | EUF07663 | e3hs0H3 | A: beta sandwiches | X: jelly-roll | H: Spermadhesin, CUB domain (From Topology) | T: Spermadhesin, CUB domain | F: EUF07663 | ECOD (1.6) |
| G [auth H] | A2M_recep | e3hs0H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: A2M_recep | ECOD (1.6) |
| C | NTR | e3hs0C1 | A: beta barrels | X: OB-fold | H: TIMP-like (From Topology) | T: TIMP-like | F: NTR | ECOD (1.6) |
| C | EUF07663 | e3hs0C3 | A: beta sandwiches | X: jelly-roll | H: Spermadhesin, CUB domain (From Topology) | T: Spermadhesin, CUB domain | F: EUF07663 | ECOD (1.6) |
| C | A2M_recep | e3hs0C2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: A2M_recep | ECOD (1.6) |
| F [auth G] | EUF07660 | e3hs0G3 | A: beta sandwiches | X: jelly-roll | H: Spermadhesin, CUB domain (From Topology) | T: Spermadhesin, CUB domain | F: EUF07660 | ECOD (1.6) |
| F [auth G] | A2M_C | e3hs0G2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_C | ECOD (1.6) |
| F [auth G] | A2M_N | e3hs0G1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N | ECOD (1.6) |
| B | EUF07660 | e3hs0B4 | A: beta sandwiches | X: jelly-roll | H: Spermadhesin, CUB domain (From Topology) | T: Spermadhesin, CUB domain | F: EUF07660 | ECOD (1.6) |
| B | A2M_C | e3hs0B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_C | ECOD (1.6) |
| B | A2M_N | e3hs0B3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N | ECOD (1.6) |
| E [auth F] | A2M_N_1 | e3hs0F4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N_1 | ECOD (1.6) |
| E [auth F] | KOG1366_2nd_1 | e3hs0F2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: KOG1366_2nd_1 | ECOD (1.6) |
| E [auth F] | MG4 | e3hs0F3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: MG4 | ECOD (1.6) |
| E [auth F] | KOG1366_1st | e3hs0F5 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: KOG1366_1st | ECOD (1.6) |
| E [auth F] | ANATO | e3hs0F6 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ANATO | ECOD (1.6) |
| E [auth F] | A2M_N_2 | e3hs0F1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N_2 | ECOD (1.6) |
| A | A2M_N_1 | e3hs0A4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N_1 | ECOD (1.6) |
| A | KOG1366_2nd_1 | e3hs0A2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: KOG1366_2nd_1 | ECOD (1.6) |
| A | MG4 | e3hs0A3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: MG4 | ECOD (1.6) |
| A | KOG1366_1st | e3hs0A5 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: KOG1366_1st | ECOD (1.6) |
| A | ANATO | e3hs0A6 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: ANATO | ECOD (1.6) |
| A | A2M_N_2 | e3hs0A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: A2M_N_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| D, H [auth I] | PF00092 | von Willebrand factor type A domain (VWA) | von Willebrand factor type A domain | Domain | |
| D, H [auth I] | PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | Domain | |
| D, H [auth I] | PF00089 | Trypsin (Trypsin) | Trypsin | Domain | |














