3IDO | pdb_00003ido

Crystal structure of protein tyrosine phosphatase from Entamoeba histolytica with a phosphotyrosine crude mimic HEPES molecule in the active site

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d3idob1	Alpha and beta proteins (a/b)	Phosphotyrosine protein phosphatases I-like	Phosphotyrosine protein phosphatases I	automated matches	automated matches	(Entamoeba histolytica HM-1:IMSS ) [TaxId: 294381 ],	SCOPe (2.08)
B	d3idob2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Entamoeba histolytica HM-1:IMSS ) [TaxId: 294381 ],	SCOPe (2.08)
A	d3idoa1	Alpha and beta proteins (a/b)	Phosphotyrosine protein phosphatases I-like	Phosphotyrosine protein phosphatases I	automated matches	automated matches	(Entamoeba histolytica HM-1:IMSS ) [TaxId: 294381 ],	SCOPe (2.08)
A	d3idoa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Entamoeba histolytica HM-1:IMSS ) [TaxId: 294381 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Phosphotyrosine protein phosphatases I	8061592	3000290	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Phosphotyrosine protein phosphatases I	8061592	3000290	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e3idoB1	A: HTH	X: HTH	H: tetra-helical, lambda repressor-like	T: YgbB	F:	ECOD (20:10:01)
A		e3idoA1	A: Alpha-beta plaits	X: HMA-related	H: HMA, heavy metal-associated domain	T:	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (4.3.0)
A	3.40.50.2300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Response regulator	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF01451	Low molecular weight phosphotyrosine protein phosphatase (LMWPc)	Low molecular weight phosphotyrosine protein phosphatase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Protein tyrosine phosphatase	phosphoric ester hydrolase activity acid phosphatase activity hydrolase activity, acting on ester bonds phosphatase activity hydrolase activity catalytic activity phosphoprotein phosphatase activity catalytic activity, acting on a protein protein tyrosine phosphatase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR052995	Low molecular weight protein-tyrosine-phosphatase	Family
A, B	IPR017867	Protein-tyrosine phosphatase, low molecular weight	Family
A, B	IPR036196	Phosphotyrosine protein phosphatase I superfamily	Homologous Superfamily
A, B	IPR023485	Phosphotyrosine protein phosphatase I	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.