3IYA | pdb_00003iya

Association of the pr peptides with dengue virus blocks membrane fusion at acidic pH

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	Flavi_propep	e3iyaF1	A: beta sandwiches	X: HSP40/DnaJ peptide-binding domain (From Topology)	H: HSP40/DnaJ peptide-binding domain (From Topology)	T: HSP40/DnaJ peptide-binding domain	F: Flavi_propep	ECOD (1.6)
D [auth E]	Flavi_propep	e3iyaE1	A: beta sandwiches	X: HSP40/DnaJ peptide-binding domain (From Topology)	H: HSP40/DnaJ peptide-binding domain (From Topology)	T: HSP40/DnaJ peptide-binding domain	F: Flavi_propep	ECOD (1.6)
B [auth D]	Flavi_propep	e3iyaD1	A: beta sandwiches	X: HSP40/DnaJ peptide-binding domain (From Topology)	H: HSP40/DnaJ peptide-binding domain (From Topology)	T: HSP40/DnaJ peptide-binding domain	F: Flavi_propep	ECOD (1.6)
E [auth C]	Flavi_glycop_C	e3iyaC1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Flavi_glycop_C	ECOD (1.6)
E [auth C]	Flavi_glycoprot	e3iyaC2	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Flavi_glycoprot	ECOD (1.6)
C [auth B]	Flavi_glycop_C	e3iyaB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Flavi_glycop_C	ECOD (1.6)
C [auth B]	Flavi_glycoprot	e3iyaB2	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Flavi_glycoprot	ECOD (1.6)
A	Flavi_glycop_C	e3iyaA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Flavi_glycop_C	ECOD (1.6)
A	Flavi_glycoprot	e3iyaA2	A: beta complex topology	X: Viral glycoprotein, central and dimerisation domains-like	H: Viral glycoprotein, central and dimerisation domains (From Topology)	T: Viral glycoprotein, central and dimerisation domains	F: Flavi_glycoprot	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth D], D [auth E], F	prM protein	structural molecule activity protein binding binding protein dimerization activity	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host symbiont-mediated perturbation of host defense response symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host process symbiont-mediated perturbation of host immune response symbiont-mediated perturbation of host innate immune response modulation of process of another organism	cellular anatomical structure membrane viral capsid virion component virion membrane extracellular region host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane other organism part host cell cytoplasm part host intracellular organelle cellular anatomical structure membrane viral capsid virion component virion membrane extracellular region host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane other organism part host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part host cell endomembrane system host intracellular region host cell endoplasmic reticulum membrane host cell nucleus viral membrane viral envelope
A, C [auth B], E [auth C]	Envelope protein	structural molecule activity protein binding binding protein dimerization activity	viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell viral process fusion of virus membrane with host endosome membrane membrane fusion involved in viral entry into host cell import into cell receptor-mediated endocytosis of virus by host cell biological process involved in interspecies interaction between organisms transport viral life cycle establishment of localization vesicle-mediated transport biological process involved in interaction with host biological process involved in symbiotic interaction localization symbiont entry into host cell clathrin-dependent endocytosis symbiont entry into host cellular process clathrin-dependent endocytosis of virus by host cell receptor-mediated endocytosis endocytosis endocytosis involved in viral entry into host cell virion attachment to host cell adhesion of symbiont to host cell adhesion of symbiont to host symbiont-mediated perturbation of host defense response symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host process symbiont-mediated perturbation of host immune response symbiont-mediated perturbation of host innate immune response modulation of process of another organism	cellular anatomical structure membrane viral capsid virion component virion membrane extracellular region host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane other organism part host cell cytoplasm part host intracellular organelle cellular anatomical structure membrane viral capsid virion component virion membrane extracellular region host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum host cell membrane other organism part host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part host cell endomembrane system host intracellular region host cell endoplasmic reticulum membrane host cell nucleus viral membrane viral envelope

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth D], D [auth E], F	IPR038055	Flaviviral glycoprotein E, dimerisation domain	Homologous Superfamily
B [auth D], D [auth E], F	IPR014756	Immunoglobulin E-set	Homologous Superfamily
B [auth D], D [auth E], F	IPR001122	Capsid protein C, flavivirus	Domain
B [auth D], D [auth E], F	IPR027287	Glycoprotein E, immunoglobulin-like domain, flavivirus	Domain
B [auth D], D [auth E], F	IPR038302	Envelope glycoprotein M superfamily, flavivirus	Homologous Superfamily
B [auth D], D [auth E], F	IPR036253	Flavivirus glycoprotein, central and dimerisation domain superfamily	Homologous Superfamily
B [auth D], D [auth E], F	IPR000069	Envelope glycoprotein M, flavivirus	Domain
B [auth D], D [auth E], F	IPR038345	Flavivirus envelope glycoprotein E, Stem/Anchor domain superfamily	Homologous Superfamily
B [auth D], D [auth E], F	IPR038688	Flavivirus polyprotein propeptide superfamily	Homologous Superfamily
B [auth D], D [auth E], F	IPR026470	Flavivirus envelope glycoprotein E, Stem/Anchor domain	Domain
B [auth D], D [auth E], F	IPR011998	Envelope glycoprotein E, central and dimerisation domain, flavivirus	Domain
B [auth D], D [auth E], F	IPR037172	Flavivirus capsid protein C superfamily	Homologous Superfamily
B [auth D], D [auth E], F	IPR013755	Flaviviral glycoprotein E, central domain, subdomain 1	Homologous Superfamily
B [auth D], D [auth E], F	IPR001157	Non-structural protein NS1, flavivirus	Domain
B [auth D], D [auth E], F	IPR013756	Flaviviral glycoprotein E, central domain, subdomain 2	Homologous Superfamily
B [auth D], D [auth E], F	IPR000336	Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily	Homologous Superfamily
B [auth D], D [auth E], F	IPR002535	Flavivirus polyprotein propeptide	Domain
A, C [auth B], E [auth C]	IPR038055	Flaviviral glycoprotein E, dimerisation domain	Homologous Superfamily
A, C [auth B], E [auth C]	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A, C [auth B], E [auth C]	IPR001122	Capsid protein C, flavivirus	Domain
A, C [auth B], E [auth C]	IPR027287	Glycoprotein E, immunoglobulin-like domain, flavivirus	Domain
A, C [auth B], E [auth C]	IPR038302	Envelope glycoprotein M superfamily, flavivirus	Homologous Superfamily
A, C [auth B], E [auth C]	IPR036253	Flavivirus glycoprotein, central and dimerisation domain superfamily	Homologous Superfamily
A, C [auth B], E [auth C]	IPR000069	Envelope glycoprotein M, flavivirus	Domain
A, C [auth B], E [auth C]	IPR038345	Flavivirus envelope glycoprotein E, Stem/Anchor domain superfamily	Homologous Superfamily
A, C [auth B], E [auth C]	IPR038688	Flavivirus polyprotein propeptide superfamily	Homologous Superfamily
A, C [auth B], E [auth C]	IPR026470	Flavivirus envelope glycoprotein E, Stem/Anchor domain	Domain
A, C [auth B], E [auth C]	IPR011998	Envelope glycoprotein E, central and dimerisation domain, flavivirus	Domain
A, C [auth B], E [auth C]	IPR037172	Flavivirus capsid protein C superfamily	Homologous Superfamily
A, C [auth B], E [auth C]	IPR013755	Flaviviral glycoprotein E, central domain, subdomain 1	Homologous Superfamily
A, C [auth B], E [auth C]	IPR001157	Non-structural protein NS1, flavivirus	Domain
A, C [auth B], E [auth C]	IPR013756	Flaviviral glycoprotein E, central domain, subdomain 2	Homologous Superfamily
A, C [auth B], E [auth C]	IPR000336	Flavivirus/Alphavirus glycoprotein, immunoglobulin-like domain superfamily	Homologous Superfamily
A, C [auth B], E [auth C]	IPR002535	Flavivirus polyprotein propeptide	Domain