3J3V

Atomic model of the immature 50S subunit from Bacillus subtilis (state I-a)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth 0]	SCOP2 Family	Ribosomal protein L32p	8081584	4000508	SCOP2 (2022-06-29)
A [auth 0]	SCOP2 Superfamily	Zn-binding ribosomal proteins	8081585	3001320	SCOP2 (2022-06-29)
J [auth F]	SCOP2 Family	Ribosomal protein L5	8073857	4001498	SCOP2 (2022-06-29)
J [auth F]	SCOP2 Superfamily	RL5-like	8073858	3001709	SCOP2 (2022-06-29)
L [auth J]	SCOP2 Family	Ribosomal protein L13	8066054	4003623	SCOP2 (2022-06-29)
L [auth J]	SCOP2 Superfamily	Ribosomal protein L13	8066055	3001134	SCOP2 (2022-06-29)
M [auth K]	SCOP2 Family	Ribosomal protein L14	8072019	4001826	SCOP2 (2022-06-29)
M [auth K]	SCOP2 Superfamily	50S Ribosomal protein L14-like	8072020	3000433	SCOP2 (2022-06-29)
N [auth L]	SCOP2 Family	Ribosomal proteins L15p and L18e	8070558	4003555	SCOP2 (2022-06-29)
N [auth L]	SCOP2 Superfamily	Ribosomal proteins L15p and L18e	8070559	3001045	SCOP2 (2022-06-29)
O [auth N]	SCOP2 Family	Prokaryotic ribosomal protein L17	8089013	4003526	SCOP2 (2022-06-29)
O [auth N]	SCOP2 Superfamily	Prokaryotic ribosomal protein L17	8089014	3000995	SCOP2 (2022-06-29)
Q [auth P]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8082419	3000334	SCOP2B (2022-06-29)
R [auth Q]	SCOP2 Family	Ribosomal protein L20	8075003	4001930	SCOP2 (2022-06-29)
R [auth Q]	SCOP2 Superfamily	Ribosomal protein L20	8075004	3000563	SCOP2 (2022-06-29)
S [auth R]	SCOP2 Family	Ribosomal protein l21p	8082436	4001630	SCOP2 (2022-06-29)
S [auth R]	SCOP2 Superfamily	l21p-like	8082437	3002005	SCOP2 (2022-06-29)
T [auth S]	SCOP2B Superfamily	Ribosomal protein L22	8076724	3001078	SCOP2B (2022-06-29)
U [auth T]	SCOP2B Superfamily	Ribosomal proteins S24e, L23 and L15e	8077095	3000210	SCOP2B (2022-06-29)
V [auth U]	SCOP2B Superfamily	Translation proteins SH3-like KOW motif containing domain	8082505	3000334	SCOP2B (2022-06-29)
W [auth X]	SCOP2 Family	Ribosomal protein L29 (L29p)	8076729	4000600	SCOP2 (2022-06-29)
W [auth X]	SCOP2 Superfamily	Ribosomal protein L29 (L29p)	8076730	3000713	SCOP2 (2022-06-29)
X [auth Y]	SCOP2B Superfamily	Ribosomal protein L30p/L7e	8076285	3001378	SCOP2B (2022-06-29)
H [auth D]	SCOP2 Family	Ribosomal protein L3	8089141	4002103	SCOP2 (2022-06-29)
H [auth D]	SCOP2 Superfamily	Translational proteins	8089142	3000811	SCOP2 (2022-06-29)
I [auth E]	SCOP2 Family	Ribosomal protein L4	8080693	4003628	SCOP2 (2022-06-29)
I [auth E]	SCOP2 Superfamily	Ribosomal protein L4	8080694	3001146	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth 0]	Ribosomal_L32p	e3j3v01	A: few secondary structure elements	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Ribosomal_L32p	ECOD (1.6)
J [auth F]	Ribosomal_L5_C	e3j3vF1	A: a+b two layers	X: Ribosomal protein L5 (From Topology)	H: Ribosomal protein L5 (From Topology)	T: Ribosomal protein L5	F: Ribosomal_L5_C	ECOD (1.6)
K [auth G]	Ribosomal_L6	e3j3vG1	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6	ECOD (1.6)
K [auth G]	Ribosomal_L6_1	e3j3vG2	A: a+b two layers	X: Ribosomal protein L6 (From Topology)	H: Ribosomal protein L6 (From Topology)	T: Ribosomal protein L6	F: Ribosomal_L6_1	ECOD (1.6)
L [auth J]	Ribosomal_L13	e3j3vJ1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal protein L13 and L16-A (From Topology)	T: Ribosomal protein L13 and L16-A	F: Ribosomal_L13	ECOD (1.6)
M [auth K]	Ribosomal_L14	e3j3vK1	A: beta barrels	X: Ribosomal protein L14-like	H: Ribosomal protein L14-related (From Topology)	T: Ribosomal protein L14-related	F: Ribosomal_L14	ECOD (1.6)
N [auth L]	Ribosomal_L27A	e3j3vL1	A: a/b three-layered sandwiches	X: Ribosomal protein L13/L15p/L18e/L32e	H: Ribosomal proteins L15p and L18e (From Topology)	T: Ribosomal proteins L15p and L18e	F: Ribosomal_L27A	ECOD (1.6)
O [auth N]	Ribosomal_L17_1	e3j3vN1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Prokaryotic ribosomal protein L17 (From Topology)	T: Prokaryotic ribosomal protein L17	F: Ribosomal_L17_1	ECOD (1.6)
P [auth O]	Ribosomal_L18p	e3j3vO1	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: Ribosomal_L18p	ECOD (1.6)
Q [auth P]	Ribosomal_L19	e3j3vP1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L19	ECOD (1.6)
R [auth Q]	Ribosomal_L20	e3j3vQ1	A: alpha arrays	X: PABP domain-like	H: Ribosomal protein L20 (From Topology)	T: Ribosomal protein L20	F: Ribosomal_L20	ECOD (1.6)
S [auth R]	Ribosomal_L21p	e3j3vR1	A: beta barrels	X: Ribosomal protein L21p (From Topology)	H: Ribosomal protein L21p (From Topology)	T: Ribosomal protein L21p	F: Ribosomal_L21p	ECOD (1.6)
B [auth 2]	Ribosomal_L34	e3j3v21	A: extended segments	X: 50S ribosomal protein L34 (From Topology)	H: 50S ribosomal protein L34 (From Topology)	T: 50S ribosomal protein L34	F: Ribosomal_L34	ECOD (1.6)
T [auth S]	Ribosomal_L22	e3j3vS1	A: a+b two layers	X: Enolase-N/ribosomal protein	H: Ribosomal protein L22 (From Topology)	T: Ribosomal protein L22	F: Ribosomal_L22	ECOD (1.6)
U [auth T]	Ribosomal_L23_2	e3j3vT1	A: a+b two layers	X: Alpha-beta plaits	H: Ribosomal proteins S24e, L23 and L15e (From Topology)	T: Ribosomal proteins S24e, L23 and L15e	F: Ribosomal_L23_2	ECOD (1.6)
V [auth U]	ribosomal_L24_1	e3j3vU1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: ribosomal_L24_1	ECOD (1.6)
W [auth X]	Ribosomal_L29	e3j3vX1	A: alpha bundles	X: Long alpha-hairpin	H: Ribosomal protein L29 (L29p) (From Topology)	T: Ribosomal protein L29 (L29p)	F: Ribosomal_L29	ECOD (1.6)
X [auth Y]	Ribosomal_L30	e3j3vY1	A: a+b two layers	X: Ribosomal protein L30p/L7e (From Topology)	H: Ribosomal protein L30p/L7e (From Topology)	T: Ribosomal protein L30p/L7e	F: Ribosomal_L30	ECOD (1.6)
C [auth 5]	Ribosomal_L1_2nd_1	e3j3v51	A: a+b two layers	X: a+b domain in Ribosomal protein L1 (From Topology)	H: a+b domain in Ribosomal protein L1 (From Topology)	T: a+b domain in Ribosomal protein L1	F: Ribosomal_L1_2nd_1	ECOD (1.6)
D [auth 6]	Ribosomal_L11	e3j3v64	A: alpha arrays	X: HTH	H: HTH	T: Ribosomal protein L11, C-terminal domain	F: Ribosomal_L11	ECOD (1.6)
D [auth 6]	Ribosomal_L11_N	e3j3v63	A: a+b two layers	X: Ribosomal protein L11/L12e N-terminal domain-like	H: Ribosomal protein L11/L12e N-terminal domain (From Topology)	T: Ribosomal protein L11/L12e N-terminal domain	F: Ribosomal_L11_N	ECOD (1.6)
G [auth C]	Ribosomal_L2_1	e3j3vC1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Ribosomal_L2_1	ECOD (1.6)
G [auth C]	Ribosomal_L2_C	e3j3vC2	A: beta barrels	X: SH3	H: SH3	T: SH3	F: Ribosomal_L2_C	ECOD (1.6)
H [auth D]	Ribosomal_L3	e3j3vD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: Ribosomal_L3	ECOD (1.6)
I [auth E]	Ribosomal_L4	e3j3vE1	A: a/b three-layered sandwiches	X: Ribosomal protein L4 (From Topology)	H: Ribosomal protein L4 (From Topology)	T: Ribosomal protein L4	F: Ribosomal_L4	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 0]	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family
J [auth F]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5		Domain
J [auth F]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
K [auth G]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
L [auth J]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
M [auth K]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain
N [auth L]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.	Domain
O [auth N]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
P [auth O]	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast	-	Family
Q [auth P]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
R [auth Q]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family
S [auth R]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
B [auth 2]	PF00468	Ribosomal protein L34 (Ribosomal_L34)	Ribosomal protein L34	-	Family
T [auth S]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
U [auth T]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
V [auth U]	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)	Ribosomal proteins 50S L24/mitochondrial 39S L24	-	Family
V [auth U]	PF00467	KOW motif (KOW)	KOW motif	-	Family
W [auth X]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
X [auth Y]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
C [auth 5]	PF00687	Ribosomal protein L1p/L10e family (Ribosomal_L1)	Ribosomal protein L1p/L10e family	This family includes prokaryotic L1 and eukaryotic L10.	Domain
D [auth 6]	PF03946	Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)	Ribosomal protein L11, N-terminal domain	The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.	Domain
D [auth 6]	PF00298	Ribosomal protein L11, RNA binding domain (Ribosomal_L11)	Ribosomal protein L11, RNA binding domain		Domain
G [auth C]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
G [auth C]	PF00181	Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)	Ribosomal Proteins L2, RNA binding domain		Domain
H [auth D]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
I [auth E]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0]	50S ribosomal protein L32	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
J [auth F]	50S ribosomal protein L5	RNA binding binding nucleic acid binding tRNA binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
K [auth G]	50S ribosomal protein L6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process cytoplasmic translation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
L [auth J]	50S ribosomal protein L13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation regulation of cellular process negative regulation of biological process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
M [auth K]	50S ribosomal protein L14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N [auth L]	50S ribosomal protein L15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
O [auth N]	50S ribosomal protein L17	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
P [auth O]	50S ribosomal protein L18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization or biogenesis RNA processing rRNA metabolic process protein metabolic process translation	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Q [auth P]	50S ribosomal protein L19	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
R [auth Q]	50S ribosomal protein L20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
S [auth R]	50S ribosomal protein L21	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
B [auth 2]	50S ribosomal protein L34	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
T [auth S]	50S ribosomal protein L22	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
U [auth T]	50S ribosomal protein L23	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
V [auth U]	50S ribosomal protein L24	DNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit nucleoid
W [auth X]	50S ribosomal protein L29	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
X [auth Y]	50S ribosomal protein L30	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
C [auth 5]	50S ribosomal protein L1	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	regulation of biosynthetic process regulation of biological process regulation of cellular process regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression regulation of gene expression biosynthetic process regulation of translation regulation of biosynthetic process regulation of biological process regulation of cellular process regulation of protein metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression regulation of gene expression biosynthetic process regulation of translation regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
D [auth 6]	50S ribosomal protein L11	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	response to stimulus response to chemical response to antibiotic biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
E [auth A]	ribosome RNA 23S	-	-	-
F [auth B]	ribosome RNA 5S	-	-	-
G [auth C]	50S ribosomal protein L2	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	biosynthetic process cytoplasmic translation metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
H [auth D]	50S ribosomal protein L3	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process ribonucleoprotein complex biogenesis RNA metabolic process primary metabolic process rRNA processing gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular component biogenesis RNA biosynthetic process ribosome biogenesis nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process cellular component organization or biogenesis RNA processing rRNA metabolic process regulation of cellular process positive regulation of biological process positive regulation of rRNA processing regulation of primary metabolic process positive regulation of metabolic process regulation of RNA metabolic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of biosynthetic process positive regulation of nucleobase-containing compound metabolic process regulation of biological process biological regulation regulation of macromolecule metabolic process regulation of rRNA processing positive regulation of RNA metabolic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of metabolic process protein metabolic process translation	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
I [auth E]	50S ribosomal protein L4	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 0]	IPR002677	Large ribosomal subunit protein bL32	Family
A [auth 0]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
A [auth 0]	IPR044957	Large ribosomal subunit protein bL32, bacterial type	Family
J [auth F]	IPR020929	Large ribosomal subunit protein uL5, conserved site	Conserved Site
J [auth F]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
J [auth F]	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
J [auth F]	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
J [auth F]	IPR020930	Large ribosomal subunit protein uL5, bacterial-type	Family
J [auth F]	IPR002132	Large ribosomal subunit protein uL5	Family
K [auth G]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
K [auth G]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
K [auth G]	IPR000702	Large ribosomal subunit protein uL6-like	Family
K [auth G]	IPR019906	Large ribosomal subunit protein uL6, bacterial-type	Family
K [auth G]	IPR002358	Large ribosomal subunit protein uL6, conserved site	Conserved Site
L [auth J]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
L [auth J]	IPR005822	Large ribosomal subunit protein uL13	Family
L [auth J]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
L [auth J]	IPR005823	Large ribosomal subunit protein uL13, bacterial-type	Family
M [auth K]	IPR005745	Large ribosomal subunit protein uL14, bacterial-type	Family
M [auth K]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
M [auth K]	IPR000218	Large ribosomal subunit protein uL14	Family
M [auth K]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
N [auth L]	IPR005749	Large ribosomal subunit protein uL15, bacterial-type	Family
N [auth L]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
N [auth L]	IPR030878	Large ribosomal subunit protein uL15	Family
N [auth L]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
N [auth L]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
O [auth N]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
O [auth N]	IPR047859	Large ribosomal subunit protein bL17, conserved site	Conserved Site
O [auth N]	IPR000456	Large ribosomal subunit protein bL17	Family
P [auth O]	IPR005484	Large ribosomal subunit protein uL18	Family
P [auth O]	IPR004389	Large ribosomal subunit protein uL18, bacterial-type	Family
Q [auth P]	IPR001857	Large ribosomal subunit protein bL19	Family
Q [auth P]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
Q [auth P]	IPR018257	Large ribosomal subunit protein bL19, conserved site	Conserved Site
Q [auth P]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
R [auth Q]	IPR049946	Large ribosomal subunit protein bL20, conserved site	Conserved Site
R [auth Q]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
R [auth Q]	IPR005813	Large ribosomal subunit protein bL20	Family
S [auth R]	IPR028909	Large ribosomal subunit protein bL21-like	Family
S [auth R]	IPR001787	Large ribosomal subunit protein bL21	Family
S [auth R]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
S [auth R]	IPR018258	Large ribosomal subunit protein bL21, conserved site	Conserved Site
B [auth 2]	IPR020939	Large ribosomal subunit protein bL34, conserved site	Conserved Site
B [auth 2]	IPR000271	Large ribosomal subunit protein bL34	Family
T [auth S]	IPR047867	Large ribosomal subunit protein uL22, bacterial/organelle-type	Family
T [auth S]	IPR018260	Large ribosomal subunit protein uL22, conserved site	Conserved Site
T [auth S]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
T [auth S]	IPR001063	Large ribosomal subunit protein uL22	Family
T [auth S]	IPR005727	Large ribosomal subunit protein uL22, bacterial/chloroplast-type	Family
U [auth T]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
U [auth T]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
U [auth T]	IPR001014	Large ribosomal subunit protein uL23, conserved site	Conserved Site
U [auth T]	IPR013025	Large ribosomal subunit protein uL23-like	Family
V [auth U]	IPR003256	Large ribosomal subunit protein uL24	Family
V [auth U]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
V [auth U]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
V [auth U]	IPR005824	KOW	Domain
V [auth U]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
V [auth U]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
W [auth X]	IPR050063	Universal ribosomal protein uL29	Family
W [auth X]	IPR001854	Large ribosomal subunit protein uL29	Family
W [auth X]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
W [auth X]	IPR018254	Large ribosomal subunit protein uL29, conserved site	Conserved Site
X [auth Y]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
X [auth Y]	IPR005996	Large ribosomal subunit protein uL30, bacterial-type	Family
X [auth Y]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
X [auth Y]	IPR018038	Large ribosomal subunit protein uL30, conserved site	Conserved Site
C [auth 5]	IPR023673	Large ribosomal subunit protein uL1, conserved site	Conserved Site
C [auth 5]	IPR016095	Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain	Homologous Superfamily
C [auth 5]	IPR005878	Large ribosomal subunit protein uL1, bacterial-type	Family
C [auth 5]	IPR023674	Ribosomal protein uL1-like	Homologous Superfamily
C [auth 5]	IPR002143	Large ribosomal subunit protein uL1	Family
C [auth 5]	IPR028364	Ribosomal protein uL1/ribosomal biogenesis protein	Family
D [auth 6]	IPR020785	Large ribosomal subunit protein uL11, conserved site	Conserved Site
D [auth 6]	IPR020783	Large ribosomal subunit protein uL11, C-terminal	Domain
D [auth 6]	IPR000911	Ribosomal protein uL11	Family
D [auth 6]	IPR036769	Large ribosomal subunit protein uL11, C-terminal domain superfamily	Homologous Superfamily
D [auth 6]	IPR006519	Large ribosomal subunit protein uL11, bacterial-type	Family
D [auth 6]	IPR020784	Large ribosomal subunit protein uL11, N-terminal	Domain
D [auth 6]	IPR036796	Large ribosomal subunit protein uL11, N-terminal domain superfamily	Homologous Superfamily
G [auth C]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
G [auth C]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
G [auth C]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
G [auth C]	IPR022671	Large ribosomal subunit protein uL2, conserved site	Conserved Site
G [auth C]	IPR005880	Large ribosomal subunit protein uL2, bacterial/organellar-type	Family
G [auth C]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
G [auth C]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
G [auth C]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
G [auth C]	IPR002171	Large ribosomal subunit protein uL2	Family
H [auth D]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
H [auth D]	IPR019927	Large ribosomal subunit protein uL3, bacterial/organelle-type	Family
H [auth D]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
H [auth D]	IPR000597	Large ribosomal subunit protein uL3	Family
I [auth E]	IPR013005	Large ribosomal subunit protein uL4-like	Family
I [auth E]	IPR002136	Large ribosomal subunit protein uL4	Family
I [auth E]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily