Annotations: 3J4U

A new topology of the HK97-like fold revealed in Bordetella bacteriophage: non-covalent chainmail secured by jellyrolls

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
N	FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	e3j4uN1	A: alpha arrays	X: barrel domains in phase 1 flagellin	H: Class II aaRS and biotin synthetases	T: Class II aaRS and biotin synthetases	F: FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	ECOD (v295)
M	FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	e3j4uM1	A: alpha arrays	X: barrel domains in phase 1 flagellin	H: Class II aaRS and biotin synthetases	T: Class II aaRS and biotin synthetases	F: FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	ECOD (v295)
L	FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	e3j4uL1	A: alpha arrays	X: barrel domains in phase 1 flagellin	H: Class II aaRS and biotin synthetases	T: Class II aaRS and biotin synthetases	F: FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	ECOD (v295)
K	FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	e3j4uK1	A: alpha arrays	X: barrel domains in phase 1 flagellin	H: Class II aaRS and biotin synthetases	T: Class II aaRS and biotin synthetases	F: FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	ECOD (v295)
J	FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	e3j4uJ1	A: alpha arrays	X: barrel domains in phase 1 flagellin	H: Class II aaRS and biotin synthetases	T: Class II aaRS and biotin synthetases	F: FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	ECOD (v295)
I	FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	e3j4uI1	A: alpha arrays	X: barrel domains in phase 1 flagellin	H: Class II aaRS and biotin synthetases	T: Class II aaRS and biotin synthetases	F: FANCI_S1-cap,FANCI_S1,FANCI_S2,FANCI_S3,FANCI_S4,FANCI_HD1,FANCI_HD2	ECOD (v295)
H	Bbp16	e3j4uH1	A: alpha arrays	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: Bbp16	ECOD (v295)
G	OMPdecase	e3j4uG1	A: alpha arrays	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: OMPdecase	ECOD (v295)
F	OMPdecase	e3j4uF1	A: alpha arrays	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: OMPdecase	ECOD (v295)
E	OMPdecase	e3j4uE1	A: alpha arrays	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: OMPdecase	ECOD (v295)
D	OMPdecase	e3j4uD1	A: alpha arrays	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: OMPdecase	ECOD (v295)
C	OMPdecase	e3j4uC1	A: alpha arrays	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: OMPdecase	ECOD (v295)
B	OMPdecase	e3j4uB1	A: alpha arrays	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: OMPdecase	ECOD (v295)
A	Alpha_L_fucos	e3j4uA1	A: alpha arrays	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: Alpha_L_fucos	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
N	2.60.120.1110	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
M	2.60.120.1110	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
L	2.60.120.1110	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
K	2.60.120.1110	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
J	2.60.120.1110	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
I	2.60.120.1110	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)
H	2.60.120.1110	Mainly Beta	Sandwich	Jelly Rolls		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
H, I, J, K, L H, I, J, K, L, M, N	PF21190	Bbp16 (Bbp16)	Bbp16	-	Family
A, B, C, D, E A, B, C, D, E, F, G	PF20911	Major capsid protein GP7 (GP7)	Major capsid protein GP7	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
H, I, J, K, L H, I, J, K, L, M, N	IPR048922	Bbp16	Family
A, B, C, D, E A, B, C, D, E, F, G	IPR048813	Major capsid protein GP7-like	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.