3K6C

Crystal structure of protein ne0167 from nitrosomonas europaea

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d3k6ca_	All alpha proteins	Ferritin-like	Ferritin-like	half-ferritin	Hypothetical protein NE0167	(Nitrosomonas europaea ) [TaxId: 915 ],	SCOPe (2.08)
B	d3k6cb_	All alpha proteins	Ferritin-like	Ferritin-like	half-ferritin	Hypothetical protein NE0167	(Nitrosomonas europaea ) [TaxId: 915 ],	SCOPe (2.08)
C	d3k6cc_	All alpha proteins	Ferritin-like	Ferritin-like	half-ferritin	Hypothetical protein NE0167	(Nitrosomonas europaea ) [TaxId: 915 ],	SCOPe (2.08)
D	d3k6cd_	All alpha proteins	Ferritin-like	Ferritin-like	half-ferritin	Hypothetical protein NE0167	(Nitrosomonas europaea ) [TaxId: 915 ],	SCOPe (2.08)
E	d3k6ce_	All alpha proteins	Ferritin-like	Ferritin-like	half-ferritin	Hypothetical protein NE0167	(Nitrosomonas europaea ) [TaxId: 915 ],	SCOPe (2.08)
F	d3k6cf_	All alpha proteins	Ferritin-like	Ferritin-like	half-ferritin	Hypothetical protein NE0167	(Nitrosomonas europaea ) [TaxId: 915 ],	SCOPe (2.08)
G	d3k6cg_	All alpha proteins	Ferritin-like	Ferritin-like	half-ferritin	Hypothetical protein NE0167	(Nitrosomonas europaea ) [TaxId: 915 ],	SCOPe (2.08)
H	d3k6ch_	All alpha proteins	Ferritin-like	Ferritin-like	half-ferritin	Hypothetical protein NE0167	(Nitrosomonas europaea ) [TaxId: 915 ],	SCOPe (2.08)
I	d3k6ci_	All alpha proteins	Ferritin-like	Ferritin-like	half-ferritin	Hypothetical protein NE0167	(Nitrosomonas europaea ) [TaxId: 915 ],	SCOPe (2.08)
J	d3k6cj_	All alpha proteins	Ferritin-like	Ferritin-like	half-ferritin	Hypothetical protein NE0167	(Nitrosomonas europaea ) [TaxId: 915 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	half-ferritin	8023741	4001224	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Ferritin-like	8036121	3001658	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Ferritin-like	8036121	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8036121	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8036121	3001658	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Ferritin-like	8036121	3001658	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Ferritin-like	8036121	3001658	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ferritin-like	8036121	3001658	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Ferritin-like	8036121	3001658	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Ferritin-like	8036121	3001658	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Ferritin-like	8036121	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ferrit_encaps	e3k6cA1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
B	ferrit_encaps	e3k6cB1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
C	ferrit_encaps	e3k6cC1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
D	ferrit_encaps	e3k6cD1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
E	ferrit_encaps	e3k6cE1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
F	ferrit_encaps	e3k6cF1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
G	ferrit_encaps	e3k6cG1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
H	ferrit_encaps	e3k6cH1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
I	ferrit_encaps	e3k6cI1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)
J	ferrit_encaps	e3k6cJ1	A: alpha bundles	X: Ferritin/Heme oxygenase/4-helical cytokines	H: Ferritin/Heme oxygenase	T: Ferritin	F: ferrit_encaps	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	6.10.140.1960	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
B	6.10.140.1960	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
C	6.10.140.1960	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
D	6.10.140.1960	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
E	6.10.140.1960	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
F	6.10.140.1960	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
G	6.10.140.1960	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
H	6.10.140.1960	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
I	6.10.140.1960	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
J	6.10.140.1960	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	PF22277	EncFtn-like (EncFtn-like)	EncFtn-like	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	Uncharacterized protein NE0167	oxidoreductase activity, acting on metal ions oxidoreductase activity ferroxidase activity oxidoreductase activity, acting on metal ions, oxygen as acceptor catalytic activity	-	intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle encapsulin nanocompartment cellular anatomical entity non-membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR030907	Encapsulin-associated ferritin-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.