Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad3me2a_ All beta proteins TNF-like TNF-like TNF-like automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyTNF-like 8032348 3000061 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATNFe3me2A1 A: beta sandwichesX: jelly-rollH: TNF-like (From Topology)T: TNF-likeF: TNFECOD (1.6)
B [auth R]TNFR_c6e3me2R2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: TNFR_c6ECOD (1.6)
B [auth R]TNFRSF11A_1ste3me2R3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: TNFRSF11A_1stECOD (1.6)
B [auth R]TNFRSF11A_2nde3me2R1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: TNF receptor-likeF: TNFRSF11A_2ndECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.120.40 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B [auth R]2.10.50.10 Mainly Beta Ribbon Tumor Necrosis Factor Receptor, subunit A domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00229TNF(Tumour Necrosis Factor) family (TNF)TNF(Tumour Necrosis Factor) family- Domain
B [auth R]PF18278Receptor activator of the NF-KB cysteine-rich repeat domain 2 (RANK_CRD_2)Receptor activator of the NF-KB cysteine-rich repeat domain 2This domain is found in the receptor activator of the NF-KB (RANK) present in Mus musculus. RANK and its cognate ligand RANKL play a role in bone remodelling, immune function and mammary gland development in conjunction with various cytokines and hor ...This domain is found in the receptor activator of the NF-KB (RANK) present in Mus musculus. RANK and its cognate ligand RANKL play a role in bone remodelling, immune function and mammary gland development in conjunction with various cytokines and hormones. The binding of RANKL to RANK causes trimerisation of the receptor, which activates the signalling pathway and results in osteoclastogenesis from progenitor cells and the activation of mature osteoclasts receptor activator of the NF-KB. This domain is the second of four cysteine rich pseudo-repeat domains (CRDs) and so is known as CRD2. RANK moves via a hinge region between CRD2 and CRD3 to make close contact with RANKL [1].
Domain
B [auth R]PF00020TNFR/NGFR cysteine-rich region (TNFR_c6)TNFR/NGFR cysteine-rich region- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Tumor necrosis factor ligand superfamily member 11
B [auth R]Tumor necrosis factor receptor superfamily member 11A