Crystal structure of a FMN/FAD- and NAD(P)H-dependent nitroreductase (nfnB, IL2077) from Idiomarina loihiensis L2TR at 1.90 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | d3of4c_ | Alpha and beta proteins (a+b) | FMN-dependent nitroreductase-like | FMN-dependent nitroreductase-like | automated matches | automated matches | TBD (Idiomarina loihiensis ) [TaxId: 135577 ], | SCOPe (2.08) |
| B | d3of4b_ | Alpha and beta proteins (a+b) | FMN-dependent nitroreductase-like | FMN-dependent nitroreductase-like | automated matches | automated matches | TBD (Idiomarina loihiensis ) [TaxId: 135577 ], | SCOPe (2.08) |
| A | d3of4a_ | Alpha and beta proteins (a+b) | FMN-dependent nitroreductase-like | FMN-dependent nitroreductase-like | automated matches | automated matches | TBD (Idiomarina loihiensis ) [TaxId: 135577 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | FMN-dependent nitroreductase-like | 8080672 | 3001947 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | FMN-dependent nitroreductase-like | 8080672 | 3001947 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | NADH oxidase/flavin reductase | 8080671 | 4001599 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | FMN-dependent nitroreductase-like | 8080672 | 3001947 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | e3of4C1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: SdrG_C_C | F: | ECOD (20:10:01) | |
| B | e3of4B1 | A: Alpha-beta plaits | X: Phage tail protein-like | H: Transmembrane protein 14A | T: SdrG_C_C | F: | ECOD (20:10:01) | |
| A | e3of4A1 | A: Retrovirus capsid protein | X: Ubiquitin-related | H: Ubiquitin-like | T: Stap_Strp_tox_C | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.40.109.10 | Alpha Beta | 3-Layer(aba) Sandwich | NADH Oxidase | NADH Oxidase | CATH (4.3.0) |
| B | 3.40.109.10 | Alpha Beta | 3-Layer(aba) Sandwich | NADH Oxidase | NADH Oxidase | CATH (4.3.0) |
| A | 3.40.109.10 | Alpha Beta | 3-Layer(aba) Sandwich | NADH Oxidase | NADH Oxidase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00881 | Nitroreductase family (Nitroreductase) | Nitroreductase family | The nitroreductase family comprises a group of FMN- or FAD-dependent and NAD(P)H-dependent enzymes able to metabolize nitrosubstituted compounds. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Nitroreductase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029479 | Nitroreductase | Domain | |
| IPR000415 | Nitroreductase-like | Homologous Superfamily |
