3PJT
Structure of Pseudomonas fluorescence LapD EAL domain complexed with c-di-GMP, C2221
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EAL | e3pjtA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: EAL domain (From Topology) | T: EAL domain | F: EAL | ECOD (1.6) |
B | EAL | e3pjtB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: EAL domain (From Topology) | T: EAL domain | F: EAL | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.450 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | EAL domain | CATH (4.3.0) |
B | 3.20.20.450 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | EAL domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00563 | EAL domain (EAL) | EAL domain | This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues. The EAL domain is a good candidate for a diguanylate phosphodiesterase function [1]. The domain contains many conserved acidic residues that ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Cyclic dimeric GMP binding protein |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000160 | GGDEF domain | Domain | |
IPR003660 | HAMP domain | Domain | |
IPR032244 | LapD/MoxY, periplasmic domain | Domain | |
IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | Homologous Superfamily | |
IPR050706 | Cyclic di-GMP phosphodiesterase-like | Family | |
IPR042461 | LapD/MoxY periplasmic domain, C-terminal | Homologous Superfamily | |
IPR001633 | EAL domain | Domain | |
IPR035919 | EAL domain superfamily | Homologous Superfamily | |
IPR029787 | Nucleotide cyclase | Homologous Superfamily |