3Q34
The crystal structure of YceI-like family protein from Pseudomonas syringae
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | YceI | e3q34A1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Hypothetical protein TT1927B (From Topology) | T: Hypothetical protein TT1927B | F: YceI | ECOD (1.6) |
B | YceI | e3q34B1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Hypothetical protein TT1927B (From Topology) | T: Hypothetical protein TT1927B | F: YceI | ECOD (1.6) |
C | YceI | e3q34C1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Hypothetical protein TT1927B (From Topology) | T: Hypothetical protein TT1927B | F: YceI | ECOD (1.6) |
D | YceI | e3q34D1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Hypothetical protein TT1927B (From Topology) | T: Hypothetical protein TT1927B | F: YceI | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.128.110 | Mainly Beta | Beta Barrel | Lipocalin | Lipid/polyisoprenoid-binding, YceI-like | CATH (4.3.0) |
B | 2.40.128.110 | Mainly Beta | Beta Barrel | Lipocalin | Lipid/polyisoprenoid-binding, YceI-like | CATH (4.3.0) |
C | 2.40.128.110 | Mainly Beta | Beta Barrel | Lipocalin | Lipid/polyisoprenoid-binding, YceI-like | CATH (4.3.0) |
D | 2.40.128.110 | Mainly Beta | Beta Barrel | Lipocalin | Lipid/polyisoprenoid-binding, YceI-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04264 | YceI-like domain (YceI) | YceI-like domain | E. coli YceI is a base-induced periplasmic protein [1]. The recent structure of a member of this family shows that it binds to poly-isoprenoid [2]. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lip ... | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Monotopic/peripheral | All beta monotopic/peripheral | Streptavidin-like | Polyisoprenoid-binding protein |