Cytochrome bc1 complex from chicken with pfvs-designed moa inhibitor bound
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Protein Modification Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8042105 | 3000966 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Transmembrane di-heme cytochromes | 8042108 | 3000517 | SCOP2B (2022-06-29) |
| M [auth P] | SCOP2B Superfamily | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8042105 | 3000966 | SCOP2B (2022-06-29) |
| M [auth P] | SCOP2B Superfamily | Transmembrane di-heme cytochromes | 8042108 | 3000517 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068577 | 3000797 | SCOP2B (2022-06-29) |
| P [auth S] | SCOP2B Superfamily | 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068577 | 3000797 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8073735 | 3000770 | SCOP2B (2022-06-29) |
| Q [auth T] | SCOP2B Superfamily | Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8073735 | 3000770 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068575 | 3000806 | SCOP2B (2022-06-29) |
| R [auth U] | SCOP2B Superfamily | Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068575 | 3000806 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068589 | 3000779 | SCOP2B (2022-06-29) |
| T [auth W] | SCOP2B Superfamily | Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) | 8068589 | 3000779 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Anemone_cytotox | e3tguA1 | A: alpha bundles | X: Flavodoxin-like | H: SH3 | T: SH3 | F: Anemone_cytotox | ECOD (develop294) |
| K [auth N] | Rrf2 | e3tguN1 | A: alpha bundles | X: beta-Grasp | H: HTH | T: winged helix domain | F: Rrf2 | ECOD (develop294) |
| B | Anemone_cytotox | e3tguB1 | A: alpha bundles | X: Flavodoxin-like | H: SH3 | T: SH3 | F: Anemone_cytotox | ECOD (develop294) |
| L [auth O] | PI3_PI4_kinase | e3tguO1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle | H: Anticodon-binding domain of Class II aaRS | T: Anticodon-binding domain of Class II aaRS | F: PI3_PI4_kinase | ECOD (develop294) |
| C | Anemone_cytotox | e3tguC1 | A: alpha bundles | X: Flavodoxin-like | H: SH3 | T: SH3 | F: Anemone_cytotox | ECOD (develop294) |
| M [auth P] | Rrf2 | e3tguP1 | A: alpha bundles | X: beta-Grasp | H: HTH | T: winged helix domain | F: Rrf2 | ECOD (develop294) |
| D | Anemone_cytotox | e3tguD1 | A: alpha bundles | X: Flavodoxin-like | H: SH3 | T: SH3 | F: Anemone_cytotox | ECOD (develop294) |
| N [auth Q] | Rrf2 | e3tguQ1 | A: alpha bundles | X: beta-Grasp | H: HTH | T: winged helix domain | F: Rrf2 | ECOD (develop294) |
| E | SBP_bac_1 | e3tguE2 | A: alpha bundles | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: amino-terminal domain of OmpATb | F: SBP_bac_1 | ECOD (develop294) |
| E | Rad60-SLD | e3tguE3 | A: alpha bundles | X: TIM beta/alpha-barrel | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Rad60-SLD | ECOD (develop294) |
| O [auth R] | SBP_bac_1 | e3tguR2 | A: alpha bundles | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: amino-terminal domain of OmpATb | F: SBP_bac_1 | ECOD (develop294) |
| O [auth R] | Rad60-SLD | e3tguR3 | A: alpha bundles | X: TIM beta/alpha-barrel | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Rad60-SLD | ECOD (develop294) |
| F | Anemone_cytotox | e3tguF1 | A: alpha bundles | X: Flavodoxin-like | H: SH3 | T: SH3 | F: Anemone_cytotox | ECOD (develop294) |
| P [auth S] | Cathelicidins | e3tguS1 | A: alpha bundles | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Cathelicidins | ECOD (develop294) |
| G | e3tguG2 | A: alpha bundles | X: DEATH domain | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: | ECOD (develop294) | |
| Q [auth T] | e3tguT2 | A: alpha bundles | X: DEATH domain | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: | ECOD (develop294) | |
| H | Anemone_cytotox | e3tguH1 | A: alpha bundles | X: Flavodoxin-like | H: SH3 | T: SH3 | F: Anemone_cytotox | ECOD (develop294) |
| R [auth U] | FtsJ | e3tguU1 | A: alpha bundles | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: FtsJ | ECOD (develop294) |
| I | zf-MYND | e3tguI1 | A: alpha bundles | X: jelly-roll | H: Double-stranded beta-helix | T: Double-stranded beta-helix | F: zf-MYND | ECOD (develop294) |
| S [auth V] | DNA_topoisoIV | e3tguV1 | A: alpha bundles | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: DNA_topoisoIV | ECOD (develop294) |
| J | Anemone_cytotox | e3tguJ1 | A: alpha bundles | X: Flavodoxin-like | H: SH3 | T: SH3 | F: Anemone_cytotox | ECOD (develop294) |
| T [auth W] | FtsJ | e3tguW1 | A: alpha bundles | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: FtsJ | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C, M [auth P] | PF00032 | Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C) | Cytochrome b(C-terminal)/b6/petD | Domain | |
| C, M [auth P] | PF00033 | Cytochrome b/b6/petB (Cytochrome_B) | Cytochrome b/b6/petB | Domain | |
| E, O [auth R] | PF02921 | Ubiquinol cytochrome reductase transmembrane region (UCR_TM) | Ubiquinol cytochrome reductase transmembrane region | - | Family |
| E, O [auth R] | PF00355 | Rieske [2Fe-2S] domain (Rieske) | Rieske [2Fe-2S] domain | The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ... | Domain |
| I, S [auth V] | PF09165 | Ubiquinol-cytochrome c reductase 8 kDa, N-terminal (Ubiq-Cytc-red_N) | Ubiquinol-cytochrome c reductase 8 kDa, N-terminal | Members of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Electron transport chain complex III (bc1 and b6f) superfamily | Cytochrome bc1 and b6f complexes |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| C, M [auth P] | FME | Parent Component: MET :  AA0021 , AA0566 :  N-formyl-L-methionine residue MOD:00030 , N-formyl-L-methionine (Met) MOD:00482 , N-[(L-histidin-1'-yl)methyl]-L-methionine (fMet) MOD:01890 , N-[(L-histidin-1'-yl)methyl]-L-methionine (Met) MOD:01891 |
| I, S [auth V] | AME | Parent Component: MET :  AA0021 , AA0566 |
| I, S [auth V] | UNK | :  AA0021 , AA0566 |














