Crystal structure of human menin in complex with MLL1 and LEDGF
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D [auth C] | SCOP2B Superfamily | HIV integrase-binding domain | 8035439 | 3001321 | SCOP2B (2022-06-29) |
| F [auth D] | SCOP2B Superfamily | HIV integrase-binding domain | 8035439 | 3001321 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth C] | e3u88C1 | A: cradle loop barrel | X: RIFT-related | H: acid protease | T: TIG_SUH | F: | ECOD (20:10:01) | |
| F [auth D] | e3u88D2 | A: Fusion glycoprotein F2 | X: Fusion glycoprotein F2 | H: Fusion glycoprotein F2 | T: PTS_EIIB | F: | ECOD (20:10:01) | |
| A | e3u88A1 | A: Ribonuclease H-like | X: Ribonuclease H-like | H: Ribonuclease H-like | T: HLH | F: | ECOD (20:10:01) | |
| B | e3u88B2 | A: DP domain | X: DP domain | H: DP domain | T: YonK | F: | ECOD (20:10:01) | |
| B | e3u88B3 | A: Thioredoxin-like | X: Thioredoxin-like | H: Thioredoxin-like | T: | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D [auth C] | 1.20.930.10 | Mainly Alpha | Up-down Bundle | Transcription Elongation Factor S-II | Chain A | CATH (4.3.0) |
| F [auth D] | 1.20.930.10 | Mainly Alpha | Up-down Bundle | Transcription Elongation Factor S-II | Chain A | CATH (4.3.0) |
| C [auth M] | 6.10.250.2390 | Special | Helix non-globular | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
| E [auth N] | 6.10.250.2390 | Special | Helix non-globular | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| D [auth C], F [auth D] | PF11467 | Lens epithelium-derived growth factor (LEDGF) (LEDGF) | Lens epithelium-derived growth factor (LEDGF) | LEDGF is a chromatin-associated protein that protects cells from stress-induced apoptosis. It is the binding partner of HIV-1 integrase in human cells. The integrase binding domain (IBD) of LEDGF is a compact right-handed bundle composed of five alph ... | Domain |
| PF05053 | Menin (Menin) | Menin | - | Family |














