Structure of TAL effector PthXo1 bound to its DNA target
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d3ugma_ | All alpha proteins | Left-handed alpha-alpha superhelix | TAL effector-like | TAL (transcription activator-like) effector | PthXo1 | (Xanthomonas oryzae pv. oryzae PXO99A ) [TaxId: 360094 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TAL_effector | e3ugmA1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03377 | TAL effector repeat (TAL_effector) | TAL effector repeat | - | Repeat | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
TAL effector AvrBs3/PthA | - | |||
DNA-1 | - | - | - | |
DNA-2 | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR053450 | Transcription activator-like effector protein | Family | |
IPR005042 | TAL effector repeat | Repeat |