Annotations: 3WVI

Time-Resolved Crystal Structure of HindIII with 40 sec soaking

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Restriction endonuclease-like	8054056	3000104	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Restriction endonuclease-like	8054056	3000104	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Restriction endonuclease-like	8054056	3000104	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Restriction endonuclease-like	8054056	3000104	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Pkinase, Kdo	e3wviD1	A: alpha arrays	X: Alpha-lytic protease prodomain-like	H: Glycosyl hydrolase domain	T: Glycosyl hydrolase domain	F: Pkinase, Kdo	ECOD (v295.2)
C	Pkinase, Kdo	e3wviC1	A: alpha arrays	X: Alpha-lytic protease prodomain-like	H: Glycosyl hydrolase domain	T: Glycosyl hydrolase domain	F: Pkinase, Kdo	ECOD (v295.2)
B	Pkinase, Kdo	e3wviB1	A: alpha arrays	X: Alpha-lytic protease prodomain-like	H: Glycosyl hydrolase domain	T: Glycosyl hydrolase domain	F: Pkinase, Kdo	ECOD (v295.2)
A	Pkinase, Kdo	e3wviA1	A: alpha arrays	X: Alpha-lytic protease prodomain-like	H: Glycosyl hydrolase domain	T: Glycosyl hydrolase domain	F: Pkinase, Kdo	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.91.70	Alpha Beta	3-Layer(aba) Sandwich	Restriction Endonuclease	Type II restriction endonuclease, HindIII	CATH (4.3.0)
D	6.10.250.1510	Special	Helix non-globular	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
C	3.40.91.70	Alpha Beta	3-Layer(aba) Sandwich	Restriction Endonuclease	Type II restriction endonuclease, HindIII	CATH (4.3.0)
C	6.10.250.1510	Special	Helix non-globular	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
B	3.40.91.70	Alpha Beta	3-Layer(aba) Sandwich	Restriction Endonuclease	Type II restriction endonuclease, HindIII	CATH (4.3.0)
B	6.10.250.1510	Special	Helix non-globular	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)
A	3.40.91.70	Alpha Beta	3-Layer(aba) Sandwich	Restriction Endonuclease	Type II restriction endonuclease, HindIII	CATH (4.3.0)
A	6.10.250.1510	Special	Helix non-globular	Single alpha-helices involved in coiled-coils or other helix-helix interfaces		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF09518	HindIII restriction endonuclease (RE_HindIII)	HindIII restriction endonuclease	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E [auth F], F [auth E], G [auth H], H [auth G], I [auth K], E [auth F], F [auth E], G [auth H], H [auth G], I [auth K], J [auth L], K [auth I], L [auth J]	DNA (5'-D(GPCPCPAPAPGPCPTPTPGPGPC)-3')	-	-	-
A, B, C, D	Type-2 restriction enzyme HindIII	endonuclease activity catalytic activity, acting on a nucleic acid hydrolase activity DNA nuclease activity type II site-specific deoxyribonuclease activity restriction endodeoxyribonuclease activity DNA endonuclease activity hydrolase activity, acting on ester bonds catalytic activity, acting on DNA nuclease activity DNA endonuclease activity, producing 5'-phosphomonoesters catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR019043	Restriction endonuclease, type II, HindIII	Family
A, B, C, D	IPR038373	Restriction endonuclease, type II, HindIII superfamily	Homologous Superfamily