4BJM
Crystal structure of the flax-rust effector avrM
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF08015 | e4bjmA2 | A: alpha arrays | X: Flax-rust effector AvrM (From Topology) | H: Flax-rust effector AvrM (From Topology) | T: Flax-rust effector AvrM | F: EUF08015 | ECOD (1.6) |
A | EUF08016 | e4bjmA1 | A: alpha arrays | X: Flax-rust effector AvrM (From Topology) | H: Flax-rust effector AvrM (From Topology) | T: Flax-rust effector AvrM | F: EUF08016 | ECOD (1.6) |
B | EUF08015 | e4bjmB1 | A: alpha arrays | X: Flax-rust effector AvrM (From Topology) | H: Flax-rust effector AvrM (From Topology) | T: Flax-rust effector AvrM | F: EUF08015 | ECOD (1.6) |
B | EUF08016 | e4bjmB2 | A: alpha arrays | X: Flax-rust effector AvrM (From Topology) | H: Flax-rust effector AvrM (From Topology) | T: Flax-rust effector AvrM | F: EUF08016 | ECOD (1.6) |
C | EUF08015 | e4bjmC1 | A: alpha arrays | X: Flax-rust effector AvrM (From Topology) | H: Flax-rust effector AvrM (From Topology) | T: Flax-rust effector AvrM | F: EUF08015 | ECOD (1.6) |
C | EUF08016 | e4bjmC2 | A: alpha arrays | X: Flax-rust effector AvrM (From Topology) | H: Flax-rust effector AvrM (From Topology) | T: Flax-rust effector AvrM | F: EUF08016 | ECOD (1.6) |
D | EUF08015 | e4bjmD1 | A: alpha arrays | X: Flax-rust effector AvrM (From Topology) | H: Flax-rust effector AvrM (From Topology) | T: Flax-rust effector AvrM | F: EUF08015 | ECOD (1.6) |
D | EUF08016 | e4bjmD2 | A: alpha arrays | X: Flax-rust effector AvrM (From Topology) | H: Flax-rust effector AvrM (From Topology) | T: Flax-rust effector AvrM | F: EUF08016 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.58.1680 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
B | 1.20.58.1680 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
C | 1.20.58.1680 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
D | 1.20.58.1680 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18241 | Flax-rust effector AvrM-A (AvrM-A) | Flax-rust effector AvrM-A | This domain is found in AvrM-A present in Melampsora lini. AvrM-A is a natural variant of AvrM which is a secreted effector protein that can internalize into plant cells in the absence of the pathogen and bind to phosphoinositides. AvrM results in ef ... | Domain | |
PF18247 | Flax-rust effector AvrM N-terminal domain (AvrM_N) | Flax-rust effector AvrM N-terminal domain | This is the N-terminal domain found in AvrM present in Melampsora lini. AvrM is a secreted effector protein that can internalize into plant cells in the absence of pathogens, binds to phosphoinositides and results in effector-triggered immunity. This ... | Domain |