Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyAcsC C-terminal domain-like 8089866 3002396 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyDihydropteroate synthetase-like 8089865 3000643 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyAcsC Fe-S domain-like 8089863 3002395 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyDihydropteroate synthetase-like 8089865 3000643 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAcsC Fe-S domain-like 8089863 3002395 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyAcsC C-terminal domain-like 8089866 3002396 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyAcsC Fe-S domain-like 8089863 3002395 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyDihydropteroate synthetase-like 8089865 3000643 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyAcsC C-terminal domain-like 8089866 3002396 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyDihydropteroate synthetase-like 8089865 3000643 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyAcsC Fe-S domain-like 8089863 3002395 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyAcsC C-terminal domain-like 8089866 3002396 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyDihydropteroate synthetase-like 8089867 3000643 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyDihydropteroate synthetase-like 8089867 3000643 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyDihydropteroate synthetase-like 8089867 3000643 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyDihydropteroate synthetase-like 8089867 3000643 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACdhD_Ne4c1nA3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: CdhD_NECOD (1.6)
ACdhD_Ce4c1nA1 A: a/b three-layered sandwichesX: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)H: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)T: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunitF: CdhD_CECOD (1.6)
AFeSe4c1nA2 A: few secondary structure elementsX: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)H: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)T: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunitF: FeSECOD (1.6)
CCdhD_Ne4c1nC3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: CdhD_NECOD (1.6)
CCdhD_Ce4c1nC1 A: a/b three-layered sandwichesX: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)H: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)T: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunitF: CdhD_CECOD (1.6)
CFeSe4c1nC2 A: few secondary structure elementsX: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)H: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)T: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunitF: FeSECOD (1.6)
ECdhD_Ne4c1nE3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: CdhD_NECOD (1.6)
ECdhD_Ce4c1nE1 A: a/b three-layered sandwichesX: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)H: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)T: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunitF: CdhD_CECOD (1.6)
EFeSe4c1nE2 A: few secondary structure elementsX: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)H: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)T: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunitF: FeSECOD (1.6)
GCdhD_Ne4c1nG3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: CdhD_NECOD (1.6)
GCdhD_Ce4c1nG1 A: a/b three-layered sandwichesX: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)H: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)T: B12 binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunitF: CdhD_CECOD (1.6)
GFeSe4c1nG2 A: few secondary structure elementsX: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)H: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunit (From Topology)T: Fe-S cluster binding domain in carbon monoxide dehydrogenase corrinoid/iron-sulfur protein gamma subunitF: FeSECOD (1.6)
BCdhD_Ne4c1nB1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: CdhD_NECOD (1.6)
DCdhD_Ne4c1nD1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: CdhD_NECOD (1.6)
FCdhD_Ne4c1nF1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: CdhD_NECOD (1.6)
HCdhD_Ne4c1nH1 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: CdhD_NECOD (1.6)
IEUF08308e4c1nI3 A: a+b two layersX: Ribosomal protein L31e-likeH: Reductive activator for corrinoid/iron-sulfur protein second domain (From Topology)T: Reductive activator for corrinoid/iron-sulfur protein second domainF: EUF08308ECOD (1.6)
IDUF4445_Ce4c1nI1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DUF4445_CECOD (1.6)
IDUF4445_Ne4c1nI2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DUF4445_NECOD (1.6)
JEUF08308e4c1nJ3 A: a+b two layersX: Ribosomal protein L31e-likeH: Reductive activator for corrinoid/iron-sulfur protein second domain (From Topology)T: Reductive activator for corrinoid/iron-sulfur protein second domainF: EUF08308ECOD (1.6)
JDUF4445_Ce4c1nJ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DUF4445_CECOD (1.6)
JDUF4445_Ne4c1nJ2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DUF4445_NECOD (1.6)
L [auth X]EUF08308e4c1nX3 A: a+b two layersX: Ribosomal protein L31e-likeH: Reductive activator for corrinoid/iron-sulfur protein second domain (From Topology)T: Reductive activator for corrinoid/iron-sulfur protein second domainF: EUF08308ECOD (1.6)
L [auth X]DUF4445_Ce4c1nX1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DUF4445_CECOD (1.6)
L [auth X]DUF4445_Ne4c1nX2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DUF4445_NECOD (1.6)
KEUF08308e4c1nK3 A: a+b two layersX: Ribosomal protein L31e-likeH: Reductive activator for corrinoid/iron-sulfur protein second domain (From Topology)T: Reductive activator for corrinoid/iron-sulfur protein second domainF: EUF08308ECOD (1.6)
KDUF4445_Ce4c1nK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DUF4445_CECOD (1.6)
KDUF4445_Ne4c1nK2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: DUF4445_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.15.40 Mainly Alpha Orthogonal Bundle 3-methyladenine DNA Glycosylase II Chain A, domain 3CATH (4.3.0)
A3.20.20.20 Alpha Beta Alpha-Beta Barrel TIM Barrel Dihydropteroate synthase-likeCATH (4.3.0)
A3.40.50.11600 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
C1.10.15.40 Mainly Alpha Orthogonal Bundle 3-methyladenine DNA Glycosylase II Chain A, domain 3CATH (4.3.0)
C3.20.20.20 Alpha Beta Alpha-Beta Barrel TIM Barrel Dihydropteroate synthase-likeCATH (4.3.0)
C3.40.50.11600 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
E1.10.15.40 Mainly Alpha Orthogonal Bundle 3-methyladenine DNA Glycosylase II Chain A, domain 3CATH (4.3.0)
E3.20.20.20 Alpha Beta Alpha-Beta Barrel TIM Barrel Dihydropteroate synthase-likeCATH (4.3.0)
E3.40.50.11600 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
G1.10.15.40 Mainly Alpha Orthogonal Bundle 3-methyladenine DNA Glycosylase II Chain A, domain 3CATH (4.3.0)
G3.20.20.20 Alpha Beta Alpha-Beta Barrel TIM Barrel Dihydropteroate synthase-likeCATH (4.3.0)
G3.40.50.11600 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (4.3.0)
B3.20.20.20 Alpha Beta Alpha-Beta Barrel TIM Barrel Dihydropteroate synthase-likeCATH (4.3.0)
D3.20.20.20 Alpha Beta Alpha-Beta Barrel TIM Barrel Dihydropteroate synthase-likeCATH (4.3.0)
F3.20.20.20 Alpha Beta Alpha-Beta Barrel TIM Barrel Dihydropteroate synthase-likeCATH (4.3.0)
H3.20.20.20 Alpha Beta Alpha-Beta Barrel TIM Barrel Dihydropteroate synthase-likeCATH (4.3.0)
I3.10.20.880 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
I3.30.420.480 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
J3.10.20.880 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
J3.30.420.480 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
L [auth X]3.10.20.880 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
L [auth X]3.30.420.480 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
K3.10.20.880 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
K3.30.420.480 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E, G
PF04060Putative Fe-S cluster (FeS)Putative Fe-S clusterThis family includes a domain with four conserved cysteines that probably form an Fe-S redox cluster.Domain
A, C, E, G
PF03599CO dehydrogenase/acetyl-CoA synthase delta subunit (CdhD)CO dehydrogenase/acetyl-CoA synthase delta subunit- Family
B, D, F, H
PF03599CO dehydrogenase/acetyl-CoA synthase delta subunit (CdhD)CO dehydrogenase/acetyl-CoA synthase delta subunit- Family
I,
J,
L [auth X]
PF17651RACo middle region (Raco_middle)RACo middle region- Family
I,
J,
L [auth X]
PF17650RACo linker region (RACo_linker)RACo linker region- Family
I,
J,
L [auth X]
PF14574C-terminal domain of RACo the ASKHA domain (RACo_C_ter)C-terminal domain of RACo the ASKHA domain- Family
PF17651RACo middle region (Raco_middle)RACo middle region- Family
PF17650RACo linker region (RACo_linker)RACo linker region- Family
PF14574C-terminal domain of RACo the ASKHA domain (RACo_C_ter)C-terminal domain of RACo the ASKHA domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C, E, G
CARBON MONOXIDE DEHYDROGENASE CORRINOID/IRON-SULFUR PROTEIN, GAMMA SUBUNIT -
B, D, F, H
CO DEHYDROGENASE/ACETYL-COA SYNTHASE, IRON-SULFUR PROTEIN- - -
I,
J,
L [auth X]
IRON-SULFUR CLUSTER BINDING PROTEIN - -
IRON-SULFUR CLUSTER BINDING PROTEIN - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C, E, G
IPR016218Acetyl-CoA decarbonylase/synthase complex, gamma subunitFamily
A, C, E, G
IPR016041CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrelDomain
A, C, E, G
IPR0072024Fe-4S domainDomain
A, C, E, G
IPR011005Dihydropteroate synthase-like superfamilyHomologous Superfamily
A, C, E, G
IPR051069Acetyl-CoA decarbonylase/synthase complex subunitFamily
B, D, F, H
IPR016041CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrelDomain
B, D, F, H
IPR011005Dihydropteroate synthase-like superfamilyHomologous Superfamily
B, D, F, H
IPR051069Acetyl-CoA decarbonylase/synthase complex subunitFamily
I,
J,
L [auth X]
IPR041414RACo-like, middle regionDomain
I,
J,
L [auth X]
IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
I,
J,
L [auth X]
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
I,
J,
L [auth X]
IPR043129ATPase, nucleotide binding domainHomologous Superfamily
I,
J,
L [auth X]
IPR012675Beta-grasp domain superfamilyHomologous Superfamily
I,
J,
L [auth X]
IPR042259RACo-like, middle domain superfamilyHomologous Superfamily
I,
J,
L [auth X]
IPR027980RACo, C-terminalDomain
I,
J,
L [auth X]
IPR040506RACo linker regionDomain
I,
J,
L [auth X]
IPR052911Corrinoid activation enzymeFamily
IPR041414RACo-like, middle regionDomain
IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
IPR043129ATPase, nucleotide binding domainHomologous Superfamily
IPR012675Beta-grasp domain superfamilyHomologous Superfamily
IPR042259RACo-like, middle domain superfamilyHomologous Superfamily
IPR027980RACo, C-terminalDomain
IPR040506RACo linker regionDomain
IPR052911Corrinoid activation enzymeFamily